Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1040 |
Symbol | |
ID | 3692866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1307020 |
End bp | 1308144 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637731294 |
Product | ABC transporter, permease |
Protein accession | YP_336198 |
Protein GI | 76819634 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCGCC TCGCGATCGT CTACCGTCTC GGCGTGAAGG AACTCTGGAG CCTCGTGCGC GACCCGATCC TGCTCGTGCT GATCGCCTAC ACGTTCACCG CGTCGATCTA CTCGGCCGCG ACCGCGCGGC CCGACACGCT GCACATGGCG CCGATCGCGA TCATCGACGA GGACGCCTCG CCGCTGTCCG CGCGCATCGC ATCGGCGTTC TTTCCGCCGC AGTTCGCGCT GCCGAGGATG GTGACGCTCG CCGAAGCGGA CCGCGGCATG GACGCGGGCG ACTTCACGTT CGTGCTCGAC ATCCCGCCGA ACTTCCAGCG CGACGTGCTC GCGGGGCGGC CCGCGCAGAT CCAGCTGAAC GTCGACGCGA CGCGCATGAG CCAGGCGTTC ACGGGCAACG GCTACGTGCA GCAGATCGTG AGCGGCGAGA TCGACGATTT CGCGCGCCGC TACCGGGCGA ACACGGCGCC GCCCGTCGAC ATCGCGATGC ACATGCGCTT CAACCCGAAT CTGGACCAGA CGTGGTTCGG CTCGCTGATG GAAGTGATCA ACAACGTGAC GCTGCTGTCG ATGGTGCTCA CCGGCGCGGC GCTGATACGC GAGCGCGAGC ACGGCACGAT CGAGCACCTG CTCGTGATGC CGGTGACGCC GGGCGAGATC ATGCTGGCGA AGGTGTGGTC GATGGGGCTC GTCGTCGCGT GCGCGGCGGC GTTCTCGCTC GCGTTCGTCG TGCGCGGCGC GCTGCACGTG CCGATCGAGG GATCGGTCGC GCTCTTCGTC ATCGGCATGG CGATCCACCT GTTCGCGACG ACGTCGATGG GCATCTTTCT CGCGACGCTC GTGCGCAGCA TGCCGCAGTT CGGGATGCTG CTCGTGCTGG TGCTGCTGCC GCTGCAACTG CTGTCGGGCA GCCTGACGCC GCGCGAAAGC ATGCCGTTCG CGGTGCAGAA CATCATGCTC GCCGCGCCGA CGACGCACTT CGTCGAGATC GGGCAAGCGA TCCTCTATCG CGGCGCGGGC ATCGAGACGG TATGGCGGCA GTTCCTGATC CTGGCGGTGA TCGGCACCGC GCTGTTCCTG CTGTCGCTGA AGCGGTTTCG CAAGACGATC GGGCAGATGG CGTGA
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Protein sequence | MRRLAIVYRL GVKELWSLVR DPILLVLIAY TFTASIYSAA TARPDTLHMA PIAIIDEDAS PLSARIASAF FPPQFALPRM VTLAEADRGM DAGDFTFVLD IPPNFQRDVL AGRPAQIQLN VDATRMSQAF TGNGYVQQIV SGEIDDFARR YRANTAPPVD IAMHMRFNPN LDQTWFGSLM EVINNVTLLS MVLTGAALIR EREHGTIEHL LVMPVTPGEI MLAKVWSMGL VVACAAAFSL AFVVRGALHV PIEGSVALFV IGMAIHLFAT TSMGIFLATL VRSMPQFGML LVLVLLPLQL LSGSLTPRES MPFAVQNIML AAPTTHFVEI GQAILYRGAG IETVWRQFLI LAVIGTALFL LSLKRFRKTI GQMA
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