Gene BURPS1710b_A1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1040 
Symbol 
ID3692866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1307020 
End bp1308144 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID637731294 
ProductABC transporter, permease 
Protein accessionYP_336198 
Protein GI76819634 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGCC TCGCGATCGT CTACCGTCTC GGCGTGAAGG AACTCTGGAG CCTCGTGCGC 
GACCCGATCC TGCTCGTGCT GATCGCCTAC ACGTTCACCG CGTCGATCTA CTCGGCCGCG
ACCGCGCGGC CCGACACGCT GCACATGGCG CCGATCGCGA TCATCGACGA GGACGCCTCG
CCGCTGTCCG CGCGCATCGC ATCGGCGTTC TTTCCGCCGC AGTTCGCGCT GCCGAGGATG
GTGACGCTCG CCGAAGCGGA CCGCGGCATG GACGCGGGCG ACTTCACGTT CGTGCTCGAC
ATCCCGCCGA ACTTCCAGCG CGACGTGCTC GCGGGGCGGC CCGCGCAGAT CCAGCTGAAC
GTCGACGCGA CGCGCATGAG CCAGGCGTTC ACGGGCAACG GCTACGTGCA GCAGATCGTG
AGCGGCGAGA TCGACGATTT CGCGCGCCGC TACCGGGCGA ACACGGCGCC GCCCGTCGAC
ATCGCGATGC ACATGCGCTT CAACCCGAAT CTGGACCAGA CGTGGTTCGG CTCGCTGATG
GAAGTGATCA ACAACGTGAC GCTGCTGTCG ATGGTGCTCA CCGGCGCGGC GCTGATACGC
GAGCGCGAGC ACGGCACGAT CGAGCACCTG CTCGTGATGC CGGTGACGCC GGGCGAGATC
ATGCTGGCGA AGGTGTGGTC GATGGGGCTC GTCGTCGCGT GCGCGGCGGC GTTCTCGCTC
GCGTTCGTCG TGCGCGGCGC GCTGCACGTG CCGATCGAGG GATCGGTCGC GCTCTTCGTC
ATCGGCATGG CGATCCACCT GTTCGCGACG ACGTCGATGG GCATCTTTCT CGCGACGCTC
GTGCGCAGCA TGCCGCAGTT CGGGATGCTG CTCGTGCTGG TGCTGCTGCC GCTGCAACTG
CTGTCGGGCA GCCTGACGCC GCGCGAAAGC ATGCCGTTCG CGGTGCAGAA CATCATGCTC
GCCGCGCCGA CGACGCACTT CGTCGAGATC GGGCAAGCGA TCCTCTATCG CGGCGCGGGC
ATCGAGACGG TATGGCGGCA GTTCCTGATC CTGGCGGTGA TCGGCACCGC GCTGTTCCTG
CTGTCGCTGA AGCGGTTTCG CAAGACGATC GGGCAGATGG CGTGA
 
Protein sequence
MRRLAIVYRL GVKELWSLVR DPILLVLIAY TFTASIYSAA TARPDTLHMA PIAIIDEDAS 
PLSARIASAF FPPQFALPRM VTLAEADRGM DAGDFTFVLD IPPNFQRDVL AGRPAQIQLN
VDATRMSQAF TGNGYVQQIV SGEIDDFARR YRANTAPPVD IAMHMRFNPN LDQTWFGSLM
EVINNVTLLS MVLTGAALIR EREHGTIEHL LVMPVTPGEI MLAKVWSMGL VVACAAAFSL
AFVVRGALHV PIEGSVALFV IGMAIHLFAT TSMGIFLATL VRSMPQFGML LVLVLLPLQL
LSGSLTPRES MPFAVQNIML AAPTTHFVEI GQAILYRGAG IETVWRQFLI LAVIGTALFL
LSLKRFRKTI GQMA