| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1039 |
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| Symbol | |
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| ID | 3694531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1303769 |
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| End bp | 1307017 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637731293 |
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| Product | RND efflux system, cytoplasmic membrane extrusion protein |
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| Protein accession | YP_336197 |
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| Protein GI | 76817959 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGC CGAGCGTCGT TCGTTTTTCC GACGTCAGCC TGCGCTACGG CAAGACCGTC
GCGCTCGAGC GGATCACGCT CGAGATCCCG GCCGGTCTCA CGATCGGGTT GATCGGGCCG
GACGGCGTCG GCAAATCGAG CCTGCTCGCG CTCGCGGCCG GCGCGCGCGC GCTGCAGACG
GGCGCGGTCG ACGCGCTCGG CGGCGACATG CGCTCGCGCC GCCATCGCGA GCGCGTGTGC
CGGCGCATCG CGTACATGCC GCAGGGGCTC GGCAAGAACC TGTATCCGAC GCTCTCCGTC
GAGGAAAACC TGCAGTTCTT CGCGCGCCTG TTCGGCCACG ACGCCGACGA GCGCCGCCGC
CGGATCGACG CGCTCACGCG GAGCACCGGC CTCTTTGCGT TCCTGTCGCG GCCCGCGGGC
AAGCTCTCGG GCGGGATGAA GCAGAAGCTC GGCCTGTGTT GCGCGCTGAT CCACGATCCC
GACCTGCTGA TCCTCGACGA GCCGACGACC GGCGTCGATC CGCTCGCGCG CGCGCAGTTC
TGGGATCTGA TCGCGCGCAT TCGCTCGGAG CGGCCGGCGA TGAGCGTGAT CGTCGCGACC
GCGTACATGG ACGAGGCGCA ACGCTTCGAC TGGCTGATCG CGATGGACGC GGGCCGCGTG
CTCGCGACGG GCGCGCCCGC CGAGCTGCTC GCGCGCACCG GCTGCGATTC GCTCGAGGCG
GCCTTCATCG CACTGTTGCC CGAAGACGAA CGGCGCGGCC ACAAGCCGGT GACGCTCGAG
CCGCTGCGCG CCGACGCGCA AACCGGCACC GCGATCGAGG CGCGCGGGCT GACGATGCGC
TTCGGCGATT TCACCGCGGT CGATCACGTG AGCTTCCGGA TCCGGCGCGG CGAGATCTTC
GGCTTTCTCG GCTCGAACGG CTGCGGCAAG TCGACGACGA TGAAGATGCT CACCGGCCTG
CTGCCCGCGA CCGAGGGCAC CGCGCAGCTG TTCGGCAAGA CAGTCGATCC GAAGGACATC
AATACGCGCC GGCGCGTCGG CTACATGTCG CAGGCCTTCT CGCTGTATAG CGAACTGACG
GTGCGGCAGA ACCTCGTGCT GCACGCGCGG CTGTTCGGCG TGCCGGCCGC CGAGATCGAC
GCGCGCGTCG ACGAGATGGC GCGCCGCTTC GGCCTCGCCG ACATCTACGA CATGCTGCCG
GACAGCCTGC CGCTCGGGAT GCGGCAGCGG CTGTCGCTCG CGGTGGCGAT GGTGCACAAG
CCGGAGCTGC TGATCCTCGA CGAGCCGACC TCGGGCGTCG ATCCCGTCGC GCGCGACAGC
TTCTGGCAGT TGATGATCGA CCTCGCGCGC CGCGATCGGG TGACGATCTT CATCTCGACG
CACTTCATGA ACGAGGCGCA GCGCTGCGAC CGGATCTCGC TGATGCACGC GGGCCGCGTG
CTCGCGAGCG ATGCGCCGGC GGCGCTCGTG CGCGCGCGCG GCGCGGCGAC GCTCGAGGAG
GCCTTCATCG GCTATCTCGT CGACGCTTCG GCGCAGGAGG CGCAGGGCGG CGCGGGCGGG
CGCCCCGGCG CGGGCGAGCG CGCGGCGGGC GAAAGCCTGG CCGGTCGCGG CGCGGCGACC
GATGGCGATG CCGACGGCGC GCATGCGCGG CCCGCCGCGT ACGCGAACGG CGCGGCGCAA
CATCGCGCGC CCGATGCGGA CGCGGCCGGC ACCGACGTCG CCGCCGAGAC GGGCGCACGC
GACGACGCGC GCACCGCACA CGCGGCCGGA CATTCCGCCG GAAACGACGT ACGCGCCACG
GTGGGCTCCG AAGTCGGCTC CGAAGTCGGC TCCGATGTCG GCTCCGATGT CGCCTCCGAA
GCCGGCCCCG AAGCCGGCCT CGCAGCCAGC GCCGAAAGCG GCGCCGAACG CGCACGCGAA
CCTGCGGCGG ACATCACGGC GGATGCCGGC GCCGCAATCG ACGTCGAACC GGGCGCGAGC
GCGGAATCGG CCACGGCCGC CGTCGCCCCG GCTCGCCACG CCGAATCCGC CGCCACGTCA
CCCCGCGCAG GGAACGCGCC GGCCGGCACG CCGTTCGCCG CCGCGCCGCC GTCGCACGCC
GCGCCGGCCG AGCCGCCCCA TCGCGCATTC AGCGCGCAGC GCGCGCTCAG CTACATGTGG
CGCGAGATGC TGGAGCTGCG TCGCGATCCC GTTCGCGCGA CGCTCGCGCT GATCGGCTCG
CTCGTGCTGA TGTGCGTGAT CGGCATCGGC ATCAGCCTCG ACGTCGAGGA TCTGACCTAC
GCGGTGCTCG ACCGCGATCA GACCGAGCTG AGCCACGACT ACGCGCTGAA CCTCTCCGGC
TCGCGCTACT TCGTCGAGCG GCCGCCGATC GCCGATTACG CGGCGCTCGA CCGCCGGATG
CGCGACGGCG AGCTGTCGCT CGCGATCGAG ATTCCGCCGA ACTTCGCGCG CGACGTCGAG
CGCGGCGCGC CCGCGCAGAT CGGCATGTGG ATCGACGGCG CGATGCCGCA GCGCGCCGAG
ACGATCCGCG GCTACGCGAT CGGCATGCAC ACGATGTGGC TCGCCGACAA GGCGCGGCAC
CGCCTCGGCG TGACGCTCGC GCCGCGCGCG GAAGTGGTCA CGCGCTACCG CTACAACCCG
GACGTGAAGA GCCTGCCGGC GATGATCCCC GCCGTGATGC CGCTGCTGCT GCTGATGTTG
CCCGCGATGC TCACCGCGCT CGCCGTCGTT CGCGAACGCG AGCTCGGCTC GATCCTGAAC
CTGTACGTGA CGCCCGTCAC GCGCACCGAG TTCCTGATCG GCAAGCAGGT GCCGTACGTC
GTGCTCGCGA TGCTGAACTT CCTGCTGATG ACGATGCTCG CGCGCATCGC GTTCGACGTG
CCCGTCAAGG GCAGCTTCAT GACGCTGTTG CTCGCGGTGC TGATCTTCAA CGTCGTCGCC
ACGGGCATCG GCCTGCTCGC GTCGACGTTC ACGCGCAGCC AGGTGGCCGC GATCGTGATG
ACGATCATCG GCACGATGAT CCCGACCGTG CAGTTCGCGG GGCTGCTCAC GCCGCTGTCG
TCGCTCGAGG GCACCGGGCG CTTGATCGGC CTCGTCTATC CGGCCACCTA CATGCTGTCG
ATCAGCCGCG GCGTGTTCAA CAAGGCGCTG TCGCTCCACG AGCTCTACTC GCAGTTCTGG
CCGCTCGCCG CCTGCGTACC GGTGATCCTC GGCGCGACCA TACTGCTCTT GAAAAAACAG
GAACGCTGA
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| Protein sequence | MSAPSVVRFS DVSLRYGKTV ALERITLEIP AGLTIGLIGP DGVGKSSLLA LAAGARALQT
GAVDALGGDM RSRRHRERVC RRIAYMPQGL GKNLYPTLSV EENLQFFARL FGHDADERRR
RIDALTRSTG LFAFLSRPAG KLSGGMKQKL GLCCALIHDP DLLILDEPTT GVDPLARAQF
WDLIARIRSE RPAMSVIVAT AYMDEAQRFD WLIAMDAGRV LATGAPAELL ARTGCDSLEA
AFIALLPEDE RRGHKPVTLE PLRADAQTGT AIEARGLTMR FGDFTAVDHV SFRIRRGEIF
GFLGSNGCGK STTMKMLTGL LPATEGTAQL FGKTVDPKDI NTRRRVGYMS QAFSLYSELT
VRQNLVLHAR LFGVPAAEID ARVDEMARRF GLADIYDMLP DSLPLGMRQR LSLAVAMVHK
PELLILDEPT SGVDPVARDS FWQLMIDLAR RDRVTIFIST HFMNEAQRCD RISLMHAGRV
LASDAPAALV RARGAATLEE AFIGYLVDAS AQEAQGGAGG RPGAGERAAG ESLAGRGAAT
DGDADGAHAR PAAYANGAAQ HRAPDADAAG TDVAAETGAR DDARTAHAAG HSAGNDVRAT
VGSEVGSEVG SDVGSDVASE AGPEAGLAAS AESGAERARE PAADITADAG AAIDVEPGAS
AESATAAVAP ARHAESAATS PRAGNAPAGT PFAAAPPSHA APAEPPHRAF SAQRALSYMW
REMLELRRDP VRATLALIGS LVLMCVIGIG ISLDVEDLTY AVLDRDQTEL SHDYALNLSG
SRYFVERPPI ADYAALDRRM RDGELSLAIE IPPNFARDVE RGAPAQIGMW IDGAMPQRAE
TIRGYAIGMH TMWLADKARH RLGVTLAPRA EVVTRYRYNP DVKSLPAMIP AVMPLLLLML
PAMLTALAVV RERELGSILN LYVTPVTRTE FLIGKQVPYV VLAMLNFLLM TMLARIAFDV
PVKGSFMTLL LAVLIFNVVA TGIGLLASTF TRSQVAAIVM TIIGTMIPTV QFAGLLTPLS
SLEGTGRLIG LVYPATYMLS ISRGVFNKAL SLHELYSQFW PLAACVPVIL GATILLLKKQ
ER
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