Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1037 |
Symbol | cusC |
ID | 3693140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1301176 |
End bp | 1302702 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637731291 |
Product | RND efflux system, outer membrane protein |
Protein accession | YP_336195 |
Protein GI | 76818795 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATGC GCAACGATGC GCGTCACGAC GAACGGCATC AGCGGCGGCG CGGCATCGCG CGCCGCGCGG CGCGGCACGC GGCCGCGCTC GCGCTGTGCG CGGCCGTGTC GGGCTGCCTG TCGCTCGCGC CCGACTACGC GCGCAAGCCC CCGCCCGTGC CCGCCGCGTA CCCGGCCTAT CCGGGCGAAC CGGGCGCCGG CTCGCGCACG CTCGAGCAGC TCGGCTGGCG CGCGTATTTC GTCGATCCGC GCTTGCAGGC GCTGATCGAA ACCGCGCTCG CGAACAACCG CGATCTGCGG ATCGCCGCGC AGCGCGTCGA GCAGGCGCGC GCGGCGTACG GCATCCGCCG CGCGGACCAA TACCCGACGA TCGCCGCGAA CGCCGCATAT CTTCGCTTTC GCGAGCCGGG CGGCCTGCTG CTGCCGAGCC CGATCATCGG CGAGCTGTAT TCGGCGTCGC TCAGCGAAGT GCAATGGGAA ATCGATTTCT GGGGCCGCGT GCGCAGCCTG AAGGCGGCCG CGCTCGACAC GTTCCTCGCG AGCGACGCGT CGCGCCGCGC GGTGACGGTG AGCCTGATCG GCCAGGTCGC CGACGCGTAT CTCGCGCTGT GCGCGTACGA CGAGCGCCTC GCGCTCACCA ACGAGACGAT CGCGAGCCGC CGCGACTCGC TGCGGATCTT CCGCCGGCGC TACGAGGAAG GTGCGATCTC GAAGCTCGAT CTGACGCAAT CGGAAATCCT GCTGCAGCAG GCGCAAACGC TCGGCTCGCA GCTCCAGCAG GCGCGCGACG TGCAGCAGCA CGCGCTCGAC CTGCTCGTCG GCACGAACGC GGCCGCGCGC ACGCCCGCGT CGCTCGACGA CGCGAGCATC GCGCCCGATC TCGCGCCCGG CCTGCCGTCC GAGCTGCTCG CGAACCGGCC CGACGTGGTC GCGGCCGAGT ATCAGTTGCG CGCCGCACAC GCGAACATCG GCGCGGCGCG CGCCGCGTTC TTTCCGCGCA TCGCGCTCAC GAGCTCGATC GGCACCGGCA GCACCGAGCT GCACAACCTG TTCGCCTCCG GCACGGCCGC GTGGAACTTC ATTCCGAACC TGTCGGTGCC GATCTTCGAC GCGGGCCGCA ACATCGGCAA CCTGAAGCTC GCGAACGCGC GCCGCGACGA AGCGCTCGCC CAGTATGAGA AGACGATCCA GACGGCGTTT CGCGACGTCG CCGACGCGCT CGCCGCGCGC CACTGGCTCG CCGATCAGGT GCGCATCGCG CAGGAAACGC TCGCGACGCA AGCCGAGCGC GCGCGGCTCG CGAAGCTGCG CTACGACAGC GGCGCCGCGC GCTTTCTCGA AGTGCTCGAC GCGCAGCGCG ACTTGCTGAA CGCGCAGCAG CAGCTCGTGC AGACGCGCCG CGCGCTGCTC GCGAGCCGCG TCGCGCTGTA CGCGGCGCTC GGCGGGCGTC TGGACGAGCC CGCGCGCGAC GGCGCCGCGC CGCGCCCCTC TCCCGAACCC TCAGCGAAAC AAGGTCCGTT GTCATGA
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Protein sequence | MTMRNDARHD ERHQRRRGIA RRAARHAAAL ALCAAVSGCL SLAPDYARKP PPVPAAYPAY PGEPGAGSRT LEQLGWRAYF VDPRLQALIE TALANNRDLR IAAQRVEQAR AAYGIRRADQ YPTIAANAAY LRFREPGGLL LPSPIIGELY SASLSEVQWE IDFWGRVRSL KAAALDTFLA SDASRRAVTV SLIGQVADAY LALCAYDERL ALTNETIASR RDSLRIFRRR YEEGAISKLD LTQSEILLQQ AQTLGSQLQQ ARDVQQHALD LLVGTNAAAR TPASLDDASI APDLAPGLPS ELLANRPDVV AAEYQLRAAH ANIGAARAAF FPRIALTSSI GTGSTELHNL FASGTAAWNF IPNLSVPIFD AGRNIGNLKL ANARRDEALA QYEKTIQTAF RDVADALAAR HWLADQVRIA QETLATQAER ARLAKLRYDS GAARFLEVLD AQRDLLNAQQ QLVQTRRALL ASRVALYAAL GGRLDEPARD GAAPRPSPEP SAKQGPLS
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