Gene BURPS1710b_A0957 details

Gene Information

• Locus tag: BURPS1710b_A0957
• Symbol: slyB
• ID: 3693202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 1218760
• End bp: 1219416
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637731211
• Product: SlyB protein
• Protein accession: YP_336115
• Protein GI: 76818449
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3133] Outer membrane lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACGA AGCCCATCCA AACAACGACA ACGAAGCGCG CGGCTTTCAC GAAAACCACC 
CTGCTCTTAG CGCTCGCCTC GGCGGCCGCG CTGTCGCTGA GCGCGTGCGT CGCGCCGAAC 
GCGTACGGAC CGTATGGTTC ACAGCCGCAG TACGGCACGC CTGCCTACGC GCAGCCGTCG 
TACGCGCAGC CGGCCTACAC GCAGCCGTCG TATGCGCAGC CCGATTACTC GCAGCCCGGC 
TATCCGCAGC AGGGCTACAC GCAGCCCGGG TACCAGCAGG GCTATCAACC TGGCTATCAG 
CCCGGCTATT CGGGCTACTC GACGCAATAC GGCACGATCG CCGGCATCCG TCCGATCGGC 
GGCGCGACGA GTCCGTCGGG CGTGGCGGGC ACTGTCGTCG GCGCGCTTGT CGGCGGCGTG 
CTCGGCAACC AGATCGGCCG TGGCCACGGC CGCGACGCCG CAACCGTCAT CGGCGCGCTC 
GGCGGCGCGG TCGCGGGCAA TCAGATCGGC CAGCAGATGG GCGCGCAGCC GAGCGCGTAC 
CGCGTCGACG TGCAACTGAG CGACGGCTCG ATGCGCTCGT TCGACCTGCA AACGCCGGGT 
GACCTGCGCC CGGGCGATCG CGTGCGCGTC GACGGCAATC AGATCTCGCG GTATTGA 

 

Protein sequence

MNTKPIQTTT TKRAAFTKTT LLLALASAAA LSLSACVAPN AYGPYGSQPQ YGTPAYAQPS 
YAQPAYTQPS YAQPDYSQPG YPQQGYTQPG YQQGYQPGYQ PGYSGYSTQY GTIAGIRPIG 
GATSPSGVAG TVVGALVGGV LGNQIGRGHG RDAATVIGAL GGAVAGNQIG QQMGAQPSAY 
RVDVQLSDGS MRSFDLQTPG DLRPGDRVRV DGNQISRY