| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0812 |
|---|
| Symbol | |
|---|
| ID | 3692615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1065442 |
|---|
| End bp | 1066281 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637731066 |
|---|
| Product | polyamine ABC transporter, permease protein |
|---|
| Protein accession | YP_335971 |
|---|
| Protein GI | 76819794 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.610714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TGGCGAAGCC GCTCTTCGCG CCGCACATGT CGGGGCTCGA GCGCGCCTGG
TATTTCGCGC TGCGCGGCCT CGTCGTGCTG ACGCTCTTGT ATCTGATCCT GCCCGTGCTC
GCGATCGTGC CGCTGTCGTT CTCGTCGAGC ACGTTCCTCG TCTATCCGAT TCCGGGCTTC
TCGATGCGCT GGTACGAGAA CCTGCTCGCG TCCGACGAGT GGCGGATGGC CGCGAAGAAC
AGCTTCATCG TCGCACCCGC CGCGACGCTC GTCGCGACCG TGCTCGGCAC GCTCGCCGCG
ATCGGCCTCA CGAAGAGCGA TTTCCGCGGC AAGGGGCTGC TGATGGCGGT GCTGCTCTCG
CCGATGATCG TGCCCGTCGT CGTCGTGGGC GTCGGCATGT ATCTGTTCTT CGCGCCGCTC
GGGCTTGCGA ACACCTACAC GGGGCTCATC TGCGCGCACG CGGCGCTCGG CGTGCCGTTC
GTCGTGACGA CGGTCGCCGC GACGCTGCAG GGCTTCAATC AGAATCTCGT GCGCGCGAGC
CTGTCGCTCG GCGCGAACCC GGTGACGACG TTCTTCCGCG TGACGCTGCC CGTGATCGCG
CCGGGCGTGA TGTCGGGCGC GCTGTTCGCG TTCGCGACGT CGTTCGACGA AGTGGTCGTC
ACGCTGTTTC TCGCCGGCGC CGATCAGACG ACGCTGCCGC GCCAGATGTT CACCGGCATT
CGCGAGAACA TCAGCCCGAC GATCGCCGCG CTCGCGACGA TCCTGATCGT GTTCTCGACG
TGTCTGCTGC TCGCGCTCGA ATGGCTGCGC GGACGCCATG CGAAGCGCGC GGTAAGCTGA
|
|---|
| Protein sequence | MKLLAKPLFA PHMSGLERAW YFALRGLVVL TLLYLILPVL AIVPLSFSSS TFLVYPIPGF
SMRWYENLLA SDEWRMAAKN SFIVAPAATL VATVLGTLAA IGLTKSDFRG KGLLMAVLLS
PMIVPVVVVG VGMYLFFAPL GLANTYTGLI CAHAALGVPF VVTTVAATLQ GFNQNLVRAS
LSLGANPVTT FFRVTLPVIA PGVMSGALFA FATSFDEVVV TLFLAGADQT TLPRQMFTGI
RENISPTIAA LATILIVFST CLLLALEWLR GRHAKRAVS
|
|---|
| |