Gene BURPS1710b_A0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0618 
SymbolcepI 
ID3694148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp810759 
End bp811628 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID637730872 
ProductN-acylhomoserine lactone synthase 
Protein accessionYP_335777 
Protein GI76819605 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG3916] N-acyl-L-homoserine lactone synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0541466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCGG CCGCTTGCAT CGGACTGCCG ATCGATGCCG CGCCGGCCTG CGCGCCGAAC 
GCCGCCGCCC GCCCTCGTCG CGCCTCGCGG CGAGGCCGCG CCGCGCGCGC GCATTGCCGT
ATCGCCGTAT CGCCGCGCCT TCGTGTCGCG CAACAGCCTT CGAGACCGCG CACGCGTGCT
TCTCGACCCT CACCGCTCAT ACGCGATCGG AACGCGCGCC GCCTTCGCGC CGACGATCGA
TCCATCGGAG AACCAAGCGC CATGTCATAC ATCATCGCGG GCCGATTGAA CGAACTGCCG
CCGCACGTCC AGACCGATCT CGGCGCGTAT CGCTACGACG TGTTCGTGCG CCGGCTCGGC
TGGACGATCG CCGGCCACTC GCTCGACGAA CATGCGGAGT GGGACGAGTT CGACGGGCCG
TCGACGATTC ATGTCGTCGC GCTCGACGAC GCGCGCGAGA TCTGCGGCTA CGCACGCCTG
CTGCCGACGA CGGGCCCGTA TCTGCTGCGC GACGTGTTTG CGCATCTGCT CGGCTCGTCG
CCCGCGCCGC AATCGCCTGC CGTCTGGGAA ATGTCGCGCT TCGCCGCGTC GCGGCGGCGG
CGAAGCGCGA CCGAGCGCGA GCCGCTCGGC ATGGCGTTCT TTCCGTCGGT GCTCACGGTG
GCCGCGTCGC TCGGCGCGAC GCGCGTGGTC GGCGTGATGA CGCCATCGAT CGAACGCCTG
TACCGCCGCT CGGGCATCGC GCTGCATCGC CTCGGCAACG CGATGCCGGG CGCGGGCGGC
AGCCTGTCCG CATGCTCGAT CGATCTGCCG CGCCTCGCGT TCGCGCCGTT GGGCCGCAAG
CAGTGCGCGG CGTGCCTGGC GATGCATTGA
 
Protein sequence
MQPAACIGLP IDAAPACAPN AAARPRRASR RGRAARAHCR IAVSPRLRVA QQPSRPRTRA 
SRPSPLIRDR NARRLRADDR SIGEPSAMSY IIAGRLNELP PHVQTDLGAY RYDVFVRRLG
WTIAGHSLDE HAEWDEFDGP STIHVVALDD AREICGYARL LPTTGPYLLR DVFAHLLGSS
PAPQSPAVWE MSRFAASRRR RSATEREPLG MAFFPSVLTV AASLGATRVV GVMTPSIERL
YRRSGIALHR LGNAMPGAGG SLSACSIDLP RLAFAPLGRK QCAACLAMH