Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0599 |
Symbol | zmpA |
ID | 3693673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 789136 |
End bp | 790833 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637730853 |
Product | thermolysin metallopeptidase |
Protein accession | YP_335758 |
Protein GI | 76819684 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3227] Zinc metalloprotease (elastase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.443077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAC TGTCCTGCCT GCTGTCGGTC ACCGCGATTT CCCTTGCATG CCTCAGCGCG TTCGCGCAAG CCGACGATCC GCCGGCCGCG GCCGACCGCG CGCTGCAACT GATCCGACAG AACCCGTCCG CCTTCCACCT CGCCGCCGGC AGCGCCGCGC GCACGCTGAA GTTCGCCGGC GCGCAAGCGA AGGCGCCGGC GGACGGCGAC CAGTTCCAGG TGCGCGACGT GATCGTCGAC GCCGACGGCA CCGAGCACGT GCGCTTCGAT CGCTTCTACG CGGGGCTGCC CGTGATCGGC GGCGACGTCG TCGTCCATTC GAACCAGGGG CAACTGAAGC AGGCGAGCCT CACGCAGCCC GCGCCGATCG ATCTCGCGGG CAAGATCGGC AAGGTGGGCG AGCGCTTCGT CGTGCGCAAC GCGCCCGACG TGGGCGCGGA CGCGGCAAGA CGCGTCGCGT CGAAGCGCTT CGGCGCGGAC GTGCGCCGCG TCGACGGCGC GGATCTCGTC GTGTTCGCGC GCGACGCCGC GCCGACGCTC GCCTACGCGG TGCGCGTGTA CGGCAAGGCG ACCGACGCGC ACGGCGAGGC CGTGATCTAC TACGTCGACG CGCGCACGGG CAACGTGCTG GACGCGCAGG ACCTGATCAA GACCGCCTCC GTGACGGGCA CCGGCCGCTC GCTGTACTAC GGCAACCTGT CGCTCACGAC CGATCAGACC GGCACGAACG CGTACCGGAT GCTCGATCCG ACGCGCGGCA GCGGCTCGGT CTACGACGGG CGCGGCCTGA GCTCGGACGA AGTCGAGCAG GCGAGCGACC TGCCGATCTT CACGAGCAGC ACGAACGTGT GGGGCAACAA CACGACGAGC GACCGGCAGA CCGTCGCCGC CGACATCGAC TACGGCCTCG CGCTGACGTG GGATTACTAC AAGACCACGC ACAACCGCAA CGGCATCTTC AACGACGGCC GCGGCGTGCG CAGCTACGCG CACGTGGTGT TCGACACCGG CAGCGGCACG ACGGGCGCGA ACGCCGCGTG GCTGTCGTCG CGCGTGATGG TGTACGGCGA CGGCGAGCCG GGCACGCGGC TGCCGAAGCC CGTCGTGTCG GTCGACGTGG CCGGGCACGA GATGAGCCAC GGCGTGACCG AGGCCACCTC GAACCTGTAT TATTCGGGCG ACGCGGGCGG CCTGAACGAA TCGACGTCGG ACATCTTCGG CACGCTCGTC AAGTACTACG CGAACAATCC GAACGACCCG GGCAACTACG TGATCGGCGC GCGGATCACG AGCGGCGGCC TGCGCAAGAT GTACAAGCAG GATCTCGACG GCCGCTCATA CAGTTGCTAC CCGTCCGGCG GCTTCTCGTG GGCGAATCCG CGCCACGATC CGCACTACAC GTCGGGCGTC GGCAACCGGT TCTTCTATCT GCTCGCGGAA GGCCCGGTCG CGCCGTCGAC CGATACCGGA CTGTCGAGGA GCCAGCTCGT CTGCAACGGC GACACCGGCT TCAGCGGCCT CGGCCGCGAC AAGGCGGGCA AGATCTGGTA TCGCACGCTC ACCGTGTACC TGACCACCAA CTCCAGCTAC CCGGGCGCGC GTCGCGCGTC GATCCAGGCG GCGAACGATC TGTACGGCGT GAATTCGCTC GAGAGCGCAA CGGTCGCGCG CGCGTGGAGC GCCGCCGGCG TGAACTGA
|
Protein sequence | MKKLSCLLSV TAISLACLSA FAQADDPPAA ADRALQLIRQ NPSAFHLAAG SAARTLKFAG AQAKAPADGD QFQVRDVIVD ADGTEHVRFD RFYAGLPVIG GDVVVHSNQG QLKQASLTQP APIDLAGKIG KVGERFVVRN APDVGADAAR RVASKRFGAD VRRVDGADLV VFARDAAPTL AYAVRVYGKA TDAHGEAVIY YVDARTGNVL DAQDLIKTAS VTGTGRSLYY GNLSLTTDQT GTNAYRMLDP TRGSGSVYDG RGLSSDEVEQ ASDLPIFTSS TNVWGNNTTS DRQTVAADID YGLALTWDYY KTTHNRNGIF NDGRGVRSYA HVVFDTGSGT TGANAAWLSS RVMVYGDGEP GTRLPKPVVS VDVAGHEMSH GVTEATSNLY YSGDAGGLNE STSDIFGTLV KYYANNPNDP GNYVIGARIT SGGLRKMYKQ DLDGRSYSCY PSGGFSWANP RHDPHYTSGV GNRFFYLLAE GPVAPSTDTG LSRSQLVCNG DTGFSGLGRD KAGKIWYRTL TVYLTTNSSY PGARRASIQA ANDLYGVNSL ESATVARAWS AAGVN
|
| |