Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0408 |
Symbol | |
ID | 3693378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 566436 |
End bp | 569897 |
Gene Length | 3462 bp |
Protein Length | 1153 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637730662 |
Product | putative endonuclease/exonuclease/phosphatase family protein |
Protein accession | YP_335567 |
Protein GI | 76818411 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.352854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAT CCGGATCGCG ATCGCCTCGA CGGAGCTCGC GCACGGGATC TACGCAGCCT CCGCGGGCGG CGACGCGAGT CGGTTCGCCC CGCGGTTCGG CGAACGGATG GCCACCGACG CGCTCGGGCC GCCAATGCAA GCGCTGCGCG CGCGCTGCGA CGCGCTGCTG CAACGGCTCG GCCGCGATTG ACGCGCCGGC ACGGCCCCGC CCGCGCCCGC GCGCGGCGCC GCCCGTTTCC GCTCAGCCGG CCTTCCCGCC ACATGACGAC GCCCTATCCT TCGCCGCCCG ACGCGCGGGC AAACCGCGCC GCCGAAGCGC GCGCGCATGG CGGACTGCTC GAACCCGGCC GCAACTGCGA CGCGCTGCTG CACGCGGAGC GCTTCGCGAC GCTCATCGAC GGCGACGCGT ATTTCTCGAC GCTGCGCGCG GCGCTGCGGC GCGCGCGCCA CACGGTCTTC ATCGTCGGCT GGGACATCGA CAGCCGGCTG CGGCTCGTGC CGGACGGCGC GCACGACGGC TGGCCGGAGC CGCTCGCGGC GTTCCTGCAC GCGCTCGCGA ACGCACGCCG ACGGCTGCGG ATCTATGTGC TGGCATGGGA TTTCTCGATG ATCTACGCGC TCGAGCGCGA ATGGCCGCCC GTGTACCGCA CCGCTTGGCG CTCGCGGCAC GGCATCGTGT TCCGACTCGA CGGCACGCAC CCGCGCGGCG CGTCGCATCA CCAGAAGTTC GTCGTGATCG ACGATCGCGT CGCGTTCGTC GGCGGCTTCG ATCTGACGCG CTCGCGCTGG GACACGCCGC GGCATGCGCC CGACGAGCCG CGCCGCGTCG ATCCGAACGG CGCGCGCTAC GCGCCGTTTC ACGACGTGCA GGCAATGTTC GACGGCGACG CGGCGGCCGC GATCGGCGCG CTCGCGCGCG AGCGCTGGGC GCGCACCTGC GGCAAGCGCG TCGCGATCCG CGCGCACCGG CGGCGCGCGG CGGACGACGA TCCTTGGCCG CCCAACGCGC CGGTGGACGT GCGCGACGTG ACCCTCGCGA TCGCGCTCAC GACGCCGCGC CATCGCGGCG GCGACGAAGT CGGCCACATC CGTGCGCTGA CCGCGGATGC GATCGCGGCC GCGCGCCGCG ACCTGTACAT CGAGAACCAG TACTTCACCG CGGCCGTCGT GCGCGAGGCG CTCACCGCGC GGCTCGCGGC CGACGATCCG CCCGACGTCG TCGTGGTCGC GCCGCGCGAG CAGAGCGGCT GGCTGCAGGA AGCGACGATG GGCGTGCTGC GCGCGCGGCT GCATCGTGCG CTCGTCGACG CCGACCGCCA CGGCCGCTAC CGGCTGCTGT GTCCGCACGT CGACGGCCTC GGCGAGCTGT GCGTGAACGT GCACAGCAAG CTGATGTGCG TCGACGACGA CTATCTCGTG ATCGGCAGCG CGAACCTGAA CAACCGCTCG ATGGTGCTCG ACACCGAATG CAACATCGTG CTCGCCGCCA ACGACGAGCC GCGCGTGCGC GAGGCGATCG CGCGCACGCG CGAGCGCCTG CTCGCCGAGC ATCTGGGCGT ATCGGCCGAT GCGGTCGCCG CCGCGCGCGC CTGCACGGGC CGCCTGAATC GCGCGATCGA CGCGCTGCGC GGCGCGCATC CGCACCGCAC GCTGCGGCCG TTCACGCCGA GCGCATCCGC GGACCTCGAT GCGCTCGTGC CGGTGAGCGC GTGGCTCGAT CCGGAGCGCC CCATCGACGC GGACCGCCTC ATGAGCGAAT TCGTGCCGCG CGAGCAGAGT CGCTCGCTGA CCGCGCGCTT TCTCGCGCTC GGCGCGTTCG TGCTGTTCGC CGCGGCGCTC GCCGCCGCGT GGCGGTTCAC GCCGCTCGGC CAGCACCTGA GCGTCGCATC GCTCGCGCGG GCAGGCGCGC GCGCCGCCGA GCTGCCGGCC GCGCCCGTCG CGCTCGTCGC CGGCTACGTG GCCGCCGCGC TGCTCGCGGT GCCCGTCACG CTGCTGATCA CCGCGACGGG CCTCGTGTTC GGCGCATGGC CGGGCATCGC CTACGCGGCG GCCGGCACGC TGCTCGCGGC CGCCGCGACA TACGGCATCG GCCGCTGGCT CGGGCGCGAC GCGGTGCGGC GGCTCGCGGG CCGCCGCGCG AACCGGCTGA GCGAGCACAT CGGCCGCCGC GGCATCGTCG CGATGGCCGT GCTGCGGCTG CTGCCGATCG CGCCGTTTAC GGTCGTCAAT CTCGTCGCGG GCGCTTCGTC GATCGGGTTT CGCGACTACC TGGTCGGCAC GGCGCTCGGC ATGCTGCCGG GCATCGTGCT GACCGTCACG TTCGCGCATC AGTTGAGCGC GGCGCTCGTT CACCCCACGC CCGCCGCGTT CGCGTGGCTC GCCGCGATCG GGCTGGCGTT CGTCGGCGTG TCGGCGCTGC TGTTGCGCGC GCTGGGACGC CGACGGTGAC GCCGACGATG ATGCCGCCCG ACACGCCCAC GCCCGCCGGC GCGCCGCCGA ACGCGACCAC TGCCGACGAT GCGTTGCGCG ACATCGCGCC GCAAACGGGC GCGCGCGCGC TCGGCGCGGC GGCCGCGCGC GCGCAGCCGC GCACGCGCGA GCTGCGGATC GCCACCTACA ACATTCACGG CGGCCTGGGC GCGTGGACGG CGAGCGCCGC CGAGCGGATC GCGGTGGTGC TCGACGAACT GTGCGCCGAC GTGATCGCGC TGCAGGAAGT GCCGCTCGGC GGCGCGCGCG GAGCCGACGT GCTCGCGCAC TTGCGCGCGT GCACCGGCAT GCATGCGGCA GAAGGGCCGA CGATCGATAC TCCCGCGCGC CGCTACGGCA ACGCGGTGCT GTCGCGCTTT CCGATCCGCG CGGCGCGCAT GCTCGATCTG TCGTTCGGCA ACCGCGAGCC GCGCGGCGCG CTCGACGCGG ACATCGAATG CGGGTTCGGC GTGCTGCGCG TCGTCGCGAC GCATCTCGGG CTGTCGGCGA CCGAGCGCAG CGCGCAGGTC GCGCGGCTGC TCGCCGCGTT CGACACGCGC GCGCTGCCCG TGATCCTGCT CGGCGACATC AACGAATGGT TCGTCCGCGG CCGCGCGCTG CGCGCGCTCG TCACGCATTT CCGGCGCGCG CCCGCGCCGC GTACGTTCCC GACGCTGTGC CCGCTGTTCT CGCTCGACCG GATCTGGGTG CACCCGGGCG AATGGCTCGT CGACGTGGCG GCCCATCGCA GCGCCCGCGC GCGCCGCGCG TCCGATCACT ACCCGCTCGT CGCGCGCATT CGCGCAGCCC CAGAAACAGA CGCGGACATC GCGCAAGCGC CGGCGTCCGC TTCGCGCACG CCACCGGAGC GACCATGCGA ACCGACCGAC TCGACGGAAC CCGCCTCGAC TACTGGTGCG CCCGCGCGCT CGCCGGCGAC GACGCCACGC TGCGCTTCGT CGCCGTCGCG CCGAGCGTCG TCGTCACCGT GA
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Protein sequence | MTASGSRSPR RSSRTGSTQP PRAATRVGSP RGSANGWPPT RSGRQCKRCA RAATRCCNGS AAIDAPARPR PRPRAAPPVS AQPAFPPHDD ALSFAARRAG KPRRRSARAW RTARTRPQLR RAAARGALRD AHRRRRVFLD AARGAAARAP HGLHRRLGHR QPAAARAGRR ARRLAGAARG VPARARERTP TAADLCAGMG FLDDLRARAR MAARVPHRLA LAARHRVPTR RHAPARRVAS PEVRRDRRSR RVRRRLRSDA LALGHAAACA RRAAPRRSER RALRAVSRRA GNVRRRRGGR DRRARARALG AHLRQARRDP RAPAARGGRR SLAAQRAGGR ARRDPRDRAH DAAPSRRRRS RPHPCADRGC DRGRAPRPVH REPVLHRGRR ARGAHRAARG RRSARRRRGR AARAERLAAG SDDGRAARAA ASCARRRRPP RPLPAAVSAR RRPRRAVRER AQQADVRRRR LSRDRQREPE QPLDGARHRM QHRARRQRRA ARARGDRAHA RAPARRASGR IGRCGRRRAR LHGPPESRDR RAARRASAPH AAAVHAERIR GPRCARAGER VARSGAPHRR GPPHERIRAA RAESLADRAL SRARRVRAVR RGARRRVAVH AARPAPERRI ARAGRRARRR AAGRARRARR RLRGRRAARG ARHAADHRDG PRVRRMAGHR LRGGRHAARG RRDIRHRPLA RARRGAAARG PPREPAERAH RPPRHRRDGR AAAAADRAVY GRQSRRGRFV DRVSRLPGRH GARHAAGHRA DRHVRASVER GARSPHARRV RVARRDRAGV RRRVGAAVAR AGTPTVTPTM MPPDTPTPAG APPNATTADD ALRDIAPQTG ARALGAAAAR AQPRTRELRI ATYNIHGGLG AWTASAAERI AVVLDELCAD VIALQEVPLG GARGADVLAH LRACTGMHAA EGPTIDTPAR RYGNAVLSRF PIRAARMLDL SFGNREPRGA LDADIECGFG VLRVVATHLG LSATERSAQV ARLLAAFDTR ALPVILLGDI NEWFVRGRAL RALVTHFRRA PAPRTFPTLC PLFSLDRIWV HPGEWLVDVA AHRSARARRA SDHYPLVARI RAAPETDADI AQAPASASRT PPERPCEPTD STEPASTTGA PARSPATTPR CASSPSRRAS SSP
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