Gene BURPS1710b_A0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0408 
Symbol 
ID3693378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp566436 
End bp569897 
Gene Length3462 bp 
Protein Length1153 aa 
Translation table11 
GC content74% 
IMG OID637730662 
Productputative endonuclease/exonuclease/phosphatase family protein 
Protein accessionYP_335567 
Protein GI76818411 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.352854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAT CCGGATCGCG ATCGCCTCGA CGGAGCTCGC GCACGGGATC TACGCAGCCT 
CCGCGGGCGG CGACGCGAGT CGGTTCGCCC CGCGGTTCGG CGAACGGATG GCCACCGACG
CGCTCGGGCC GCCAATGCAA GCGCTGCGCG CGCGCTGCGA CGCGCTGCTG CAACGGCTCG
GCCGCGATTG ACGCGCCGGC ACGGCCCCGC CCGCGCCCGC GCGCGGCGCC GCCCGTTTCC
GCTCAGCCGG CCTTCCCGCC ACATGACGAC GCCCTATCCT TCGCCGCCCG ACGCGCGGGC
AAACCGCGCC GCCGAAGCGC GCGCGCATGG CGGACTGCTC GAACCCGGCC GCAACTGCGA
CGCGCTGCTG CACGCGGAGC GCTTCGCGAC GCTCATCGAC GGCGACGCGT ATTTCTCGAC
GCTGCGCGCG GCGCTGCGGC GCGCGCGCCA CACGGTCTTC ATCGTCGGCT GGGACATCGA
CAGCCGGCTG CGGCTCGTGC CGGACGGCGC GCACGACGGC TGGCCGGAGC CGCTCGCGGC
GTTCCTGCAC GCGCTCGCGA ACGCACGCCG ACGGCTGCGG ATCTATGTGC TGGCATGGGA
TTTCTCGATG ATCTACGCGC TCGAGCGCGA ATGGCCGCCC GTGTACCGCA CCGCTTGGCG
CTCGCGGCAC GGCATCGTGT TCCGACTCGA CGGCACGCAC CCGCGCGGCG CGTCGCATCA
CCAGAAGTTC GTCGTGATCG ACGATCGCGT CGCGTTCGTC GGCGGCTTCG ATCTGACGCG
CTCGCGCTGG GACACGCCGC GGCATGCGCC CGACGAGCCG CGCCGCGTCG ATCCGAACGG
CGCGCGCTAC GCGCCGTTTC ACGACGTGCA GGCAATGTTC GACGGCGACG CGGCGGCCGC
GATCGGCGCG CTCGCGCGCG AGCGCTGGGC GCGCACCTGC GGCAAGCGCG TCGCGATCCG
CGCGCACCGG CGGCGCGCGG CGGACGACGA TCCTTGGCCG CCCAACGCGC CGGTGGACGT
GCGCGACGTG ACCCTCGCGA TCGCGCTCAC GACGCCGCGC CATCGCGGCG GCGACGAAGT
CGGCCACATC CGTGCGCTGA CCGCGGATGC GATCGCGGCC GCGCGCCGCG ACCTGTACAT
CGAGAACCAG TACTTCACCG CGGCCGTCGT GCGCGAGGCG CTCACCGCGC GGCTCGCGGC
CGACGATCCG CCCGACGTCG TCGTGGTCGC GCCGCGCGAG CAGAGCGGCT GGCTGCAGGA
AGCGACGATG GGCGTGCTGC GCGCGCGGCT GCATCGTGCG CTCGTCGACG CCGACCGCCA
CGGCCGCTAC CGGCTGCTGT GTCCGCACGT CGACGGCCTC GGCGAGCTGT GCGTGAACGT
GCACAGCAAG CTGATGTGCG TCGACGACGA CTATCTCGTG ATCGGCAGCG CGAACCTGAA
CAACCGCTCG ATGGTGCTCG ACACCGAATG CAACATCGTG CTCGCCGCCA ACGACGAGCC
GCGCGTGCGC GAGGCGATCG CGCGCACGCG CGAGCGCCTG CTCGCCGAGC ATCTGGGCGT
ATCGGCCGAT GCGGTCGCCG CCGCGCGCGC CTGCACGGGC CGCCTGAATC GCGCGATCGA
CGCGCTGCGC GGCGCGCATC CGCACCGCAC GCTGCGGCCG TTCACGCCGA GCGCATCCGC
GGACCTCGAT GCGCTCGTGC CGGTGAGCGC GTGGCTCGAT CCGGAGCGCC CCATCGACGC
GGACCGCCTC ATGAGCGAAT TCGTGCCGCG CGAGCAGAGT CGCTCGCTGA CCGCGCGCTT
TCTCGCGCTC GGCGCGTTCG TGCTGTTCGC CGCGGCGCTC GCCGCCGCGT GGCGGTTCAC
GCCGCTCGGC CAGCACCTGA GCGTCGCATC GCTCGCGCGG GCAGGCGCGC GCGCCGCCGA
GCTGCCGGCC GCGCCCGTCG CGCTCGTCGC CGGCTACGTG GCCGCCGCGC TGCTCGCGGT
GCCCGTCACG CTGCTGATCA CCGCGACGGG CCTCGTGTTC GGCGCATGGC CGGGCATCGC
CTACGCGGCG GCCGGCACGC TGCTCGCGGC CGCCGCGACA TACGGCATCG GCCGCTGGCT
CGGGCGCGAC GCGGTGCGGC GGCTCGCGGG CCGCCGCGCG AACCGGCTGA GCGAGCACAT
CGGCCGCCGC GGCATCGTCG CGATGGCCGT GCTGCGGCTG CTGCCGATCG CGCCGTTTAC
GGTCGTCAAT CTCGTCGCGG GCGCTTCGTC GATCGGGTTT CGCGACTACC TGGTCGGCAC
GGCGCTCGGC ATGCTGCCGG GCATCGTGCT GACCGTCACG TTCGCGCATC AGTTGAGCGC
GGCGCTCGTT CACCCCACGC CCGCCGCGTT CGCGTGGCTC GCCGCGATCG GGCTGGCGTT
CGTCGGCGTG TCGGCGCTGC TGTTGCGCGC GCTGGGACGC CGACGGTGAC GCCGACGATG
ATGCCGCCCG ACACGCCCAC GCCCGCCGGC GCGCCGCCGA ACGCGACCAC TGCCGACGAT
GCGTTGCGCG ACATCGCGCC GCAAACGGGC GCGCGCGCGC TCGGCGCGGC GGCCGCGCGC
GCGCAGCCGC GCACGCGCGA GCTGCGGATC GCCACCTACA ACATTCACGG CGGCCTGGGC
GCGTGGACGG CGAGCGCCGC CGAGCGGATC GCGGTGGTGC TCGACGAACT GTGCGCCGAC
GTGATCGCGC TGCAGGAAGT GCCGCTCGGC GGCGCGCGCG GAGCCGACGT GCTCGCGCAC
TTGCGCGCGT GCACCGGCAT GCATGCGGCA GAAGGGCCGA CGATCGATAC TCCCGCGCGC
CGCTACGGCA ACGCGGTGCT GTCGCGCTTT CCGATCCGCG CGGCGCGCAT GCTCGATCTG
TCGTTCGGCA ACCGCGAGCC GCGCGGCGCG CTCGACGCGG ACATCGAATG CGGGTTCGGC
GTGCTGCGCG TCGTCGCGAC GCATCTCGGG CTGTCGGCGA CCGAGCGCAG CGCGCAGGTC
GCGCGGCTGC TCGCCGCGTT CGACACGCGC GCGCTGCCCG TGATCCTGCT CGGCGACATC
AACGAATGGT TCGTCCGCGG CCGCGCGCTG CGCGCGCTCG TCACGCATTT CCGGCGCGCG
CCCGCGCCGC GTACGTTCCC GACGCTGTGC CCGCTGTTCT CGCTCGACCG GATCTGGGTG
CACCCGGGCG AATGGCTCGT CGACGTGGCG GCCCATCGCA GCGCCCGCGC GCGCCGCGCG
TCCGATCACT ACCCGCTCGT CGCGCGCATT CGCGCAGCCC CAGAAACAGA CGCGGACATC
GCGCAAGCGC CGGCGTCCGC TTCGCGCACG CCACCGGAGC GACCATGCGA ACCGACCGAC
TCGACGGAAC CCGCCTCGAC TACTGGTGCG CCCGCGCGCT CGCCGGCGAC GACGCCACGC
TGCGCTTCGT CGCCGTCGCG CCGAGCGTCG TCGTCACCGT GA
 
Protein sequence
MTASGSRSPR RSSRTGSTQP PRAATRVGSP RGSANGWPPT RSGRQCKRCA RAATRCCNGS 
AAIDAPARPR PRPRAAPPVS AQPAFPPHDD ALSFAARRAG KPRRRSARAW RTARTRPQLR
RAAARGALRD AHRRRRVFLD AARGAAARAP HGLHRRLGHR QPAAARAGRR ARRLAGAARG
VPARARERTP TAADLCAGMG FLDDLRARAR MAARVPHRLA LAARHRVPTR RHAPARRVAS
PEVRRDRRSR RVRRRLRSDA LALGHAAACA RRAAPRRSER RALRAVSRRA GNVRRRRGGR
DRRARARALG AHLRQARRDP RAPAARGGRR SLAAQRAGGR ARRDPRDRAH DAAPSRRRRS
RPHPCADRGC DRGRAPRPVH REPVLHRGRR ARGAHRAARG RRSARRRRGR AARAERLAAG
SDDGRAARAA ASCARRRRPP RPLPAAVSAR RRPRRAVRER AQQADVRRRR LSRDRQREPE
QPLDGARHRM QHRARRQRRA ARARGDRAHA RAPARRASGR IGRCGRRRAR LHGPPESRDR
RAARRASAPH AAAVHAERIR GPRCARAGER VARSGAPHRR GPPHERIRAA RAESLADRAL
SRARRVRAVR RGARRRVAVH AARPAPERRI ARAGRRARRR AAGRARRARR RLRGRRAARG
ARHAADHRDG PRVRRMAGHR LRGGRHAARG RRDIRHRPLA RARRGAAARG PPREPAERAH
RPPRHRRDGR AAAAADRAVY GRQSRRGRFV DRVSRLPGRH GARHAAGHRA DRHVRASVER
GARSPHARRV RVARRDRAGV RRRVGAAVAR AGTPTVTPTM MPPDTPTPAG APPNATTADD
ALRDIAPQTG ARALGAAAAR AQPRTRELRI ATYNIHGGLG AWTASAAERI AVVLDELCAD
VIALQEVPLG GARGADVLAH LRACTGMHAA EGPTIDTPAR RYGNAVLSRF PIRAARMLDL
SFGNREPRGA LDADIECGFG VLRVVATHLG LSATERSAQV ARLLAAFDTR ALPVILLGDI
NEWFVRGRAL RALVTHFRRA PAPRTFPTLC PLFSLDRIWV HPGEWLVDVA AHRSARARRA
SDHYPLVARI RAAPETDADI AQAPASASRT PPERPCEPTD STEPASTTGA PARSPATTPR
CASSPSRRAS SSP