Gene BURPS1710b_A0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0027 
Symbol 
ID3692593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp52128 
End bp53597 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content70% 
IMG OID637730281 
Productputative sugar transport protein 
Protein accessionYP_335186 
Protein GI76818739 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.225858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACAC TCGATCTCGA CGCGCCGATC TCGACGCCGA TCCGCACCGC GAGCGACGTT 
TCGCGCCTCA TCAACGCATC GGGCGCGCGC GCGAACCACG CGCGCGTGAT CGTCCTGCTC
GCGCTCGGCG GCGTGTTCCT CGATGCGTAC GATCTGACCA CGCTGTCGTA CGGCATCGAG
GACGTGACCC GCGAGTTCGG CCTGACGCCG GCGCTGAGCG GGCTCGTCAG CGCGTCGATC
ATGATCGGCA CGATCCTCGG CAGCCTGCTC GGCGGCTGGT TCACCGACAA GGTCGGCCGC
TACCGCGTGT TCATGGCCGA CATGCTCTGC TTCGTCGTCG CCGCGATCGT GGCCGGACTC
GCGCCGAACG TAGAGGTGCT GATCGCCGCG CGCTTCGTGA TGGGGCTCGG CGTCGGCATC
GATCTGCCGG TCGCGATGGC GTTCCTGGCC GAGTTCTCGA AATTCGGCGG GCGCGGCAAC
AAGGCGTCGC GGCTCGCCGC GTGGTGCCCG ATGTGGTACG CGGCGTCGTC CGTGTGCTTC
CTGATCGTGT TCGGGCTGTA TTTCGCGCTG CCCGCCGAGC ACGCGCGCTG GCTGTGGCGC
GCGTCGCTGA TCTTCGGCGC GGCGCCGGCG CTCGCGATCA TCGCGGTACG CGGCCGCTAC
ATGAACGAAT CGCCGCTGTG GGCCGCGAAT CAAGGCAAGC TGCGCGACGC CGCGCGCATC
CTGCGCGAGT CGTACGGGAT CCGCGCGCAT GCGGCCGACG ACACGCCGCG CGCGGCACCG
TCGCAGCCGC CCGTCAGTTT TCGCGTGCTG TTCAGGCAGC CGTACCTGCC GCGCACGCTC
GTCGCGAGCG CGATGAATCT GTGCATCCCG TTCGAATACA CGGCGATCGC GTTCTTCCTG
CCGACGATCC TGACGCAGTT CCTCGGCGCG GGCGTGTTCG AGACGATCGC CGCGACGCTC
GCGCTCAACG TGCTGTTCGC GCTCACGGGC GGGTTGCTCG GCATGCGCCT CGCGTACCGG
CTGCCGTCGC GGCGCGTCGC GATCGCCGGC TTCGCGTTGC AGGCCGCGGC GCTCGTCACG
CTCGCGCTGC TCGGCCATCC GCAGACCGCG CTCGGCATCG GCGCCGCAGT GCTGATGCTC
GGCCTGTGGC TGTTCGCCGA AGGCTTCGGC CCCGGCGCGC AGATGATGAT CTATCCGGCG
CTGTCGTATC CGGCGTCGAT TCGCGGCACG GGGCTCGGCT TCGGGCGCGC GCTGACGGGC
ATCGGCAGCG CGTTCGCGCT GTTCGTGCTG CCGATCCTCA ACGCGCGCCT CGGCGCCGGC
ATGTTCTGGA TCGTGGCGAT CGCGGCATTC GTGCCGATCG TGTTTCTCGC GGCGATTCGC
TTCGAGCCGA CCGCGCGCGA TGTCGATGTC GATATCGATG CCGGCTCGCG TGCGCAAGGC
GATCGAGCGC GCGTGCGCGC CGCCGCGTAG
 
Protein sequence
MSTLDLDAPI STPIRTASDV SRLINASGAR ANHARVIVLL ALGGVFLDAY DLTTLSYGIE 
DVTREFGLTP ALSGLVSASI MIGTILGSLL GGWFTDKVGR YRVFMADMLC FVVAAIVAGL
APNVEVLIAA RFVMGLGVGI DLPVAMAFLA EFSKFGGRGN KASRLAAWCP MWYAASSVCF
LIVFGLYFAL PAEHARWLWR ASLIFGAAPA LAIIAVRGRY MNESPLWAAN QGKLRDAARI
LRESYGIRAH AADDTPRAAP SQPPVSFRVL FRQPYLPRTL VASAMNLCIP FEYTAIAFFL
PTILTQFLGA GVFETIAATL ALNVLFALTG GLLGMRLAYR LPSRRVAIAG FALQAAALVT
LALLGHPQTA LGIGAAVLML GLWLFAEGFG PGAQMMIYPA LSYPASIRGT GLGFGRALTG
IGSAFALFVL PILNARLGAG MFWIVAIAAF VPIVFLAAIR FEPTARDVDV DIDAGSRAQG
DRARVRAAA