Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0027 |
Symbol | |
ID | 3692593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 52128 |
End bp | 53597 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637730281 |
Product | putative sugar transport protein |
Protein accession | YP_335186 |
Protein GI | 76818739 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.225858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACAC TCGATCTCGA CGCGCCGATC TCGACGCCGA TCCGCACCGC GAGCGACGTT TCGCGCCTCA TCAACGCATC GGGCGCGCGC GCGAACCACG CGCGCGTGAT CGTCCTGCTC GCGCTCGGCG GCGTGTTCCT CGATGCGTAC GATCTGACCA CGCTGTCGTA CGGCATCGAG GACGTGACCC GCGAGTTCGG CCTGACGCCG GCGCTGAGCG GGCTCGTCAG CGCGTCGATC ATGATCGGCA CGATCCTCGG CAGCCTGCTC GGCGGCTGGT TCACCGACAA GGTCGGCCGC TACCGCGTGT TCATGGCCGA CATGCTCTGC TTCGTCGTCG CCGCGATCGT GGCCGGACTC GCGCCGAACG TAGAGGTGCT GATCGCCGCG CGCTTCGTGA TGGGGCTCGG CGTCGGCATC GATCTGCCGG TCGCGATGGC GTTCCTGGCC GAGTTCTCGA AATTCGGCGG GCGCGGCAAC AAGGCGTCGC GGCTCGCCGC GTGGTGCCCG ATGTGGTACG CGGCGTCGTC CGTGTGCTTC CTGATCGTGT TCGGGCTGTA TTTCGCGCTG CCCGCCGAGC ACGCGCGCTG GCTGTGGCGC GCGTCGCTGA TCTTCGGCGC GGCGCCGGCG CTCGCGATCA TCGCGGTACG CGGCCGCTAC ATGAACGAAT CGCCGCTGTG GGCCGCGAAT CAAGGCAAGC TGCGCGACGC CGCGCGCATC CTGCGCGAGT CGTACGGGAT CCGCGCGCAT GCGGCCGACG ACACGCCGCG CGCGGCACCG TCGCAGCCGC CCGTCAGTTT TCGCGTGCTG TTCAGGCAGC CGTACCTGCC GCGCACGCTC GTCGCGAGCG CGATGAATCT GTGCATCCCG TTCGAATACA CGGCGATCGC GTTCTTCCTG CCGACGATCC TGACGCAGTT CCTCGGCGCG GGCGTGTTCG AGACGATCGC CGCGACGCTC GCGCTCAACG TGCTGTTCGC GCTCACGGGC GGGTTGCTCG GCATGCGCCT CGCGTACCGG CTGCCGTCGC GGCGCGTCGC GATCGCCGGC TTCGCGTTGC AGGCCGCGGC GCTCGTCACG CTCGCGCTGC TCGGCCATCC GCAGACCGCG CTCGGCATCG GCGCCGCAGT GCTGATGCTC GGCCTGTGGC TGTTCGCCGA AGGCTTCGGC CCCGGCGCGC AGATGATGAT CTATCCGGCG CTGTCGTATC CGGCGTCGAT TCGCGGCACG GGGCTCGGCT TCGGGCGCGC GCTGACGGGC ATCGGCAGCG CGTTCGCGCT GTTCGTGCTG CCGATCCTCA ACGCGCGCCT CGGCGCCGGC ATGTTCTGGA TCGTGGCGAT CGCGGCATTC GTGCCGATCG TGTTTCTCGC GGCGATTCGC TTCGAGCCGA CCGCGCGCGA TGTCGATGTC GATATCGATG CCGGCTCGCG TGCGCAAGGC GATCGAGCGC GCGTGCGCGC CGCCGCGTAG
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Protein sequence | MSTLDLDAPI STPIRTASDV SRLINASGAR ANHARVIVLL ALGGVFLDAY DLTTLSYGIE DVTREFGLTP ALSGLVSASI MIGTILGSLL GGWFTDKVGR YRVFMADMLC FVVAAIVAGL APNVEVLIAA RFVMGLGVGI DLPVAMAFLA EFSKFGGRGN KASRLAAWCP MWYAASSVCF LIVFGLYFAL PAEHARWLWR ASLIFGAAPA LAIIAVRGRY MNESPLWAAN QGKLRDAARI LRESYGIRAH AADDTPRAAP SQPPVSFRVL FRQPYLPRTL VASAMNLCIP FEYTAIAFFL PTILTQFLGA GVFETIAATL ALNVLFALTG GLLGMRLAYR LPSRRVAIAG FALQAAALVT LALLGHPQTA LGIGAAVLML GLWLFAEGFG PGAQMMIYPA LSYPASIRGT GLGFGRALTG IGSAFALFVL PILNARLGAG MFWIVAIAAF VPIVFLAAIR FEPTARDVDV DIDAGSRAQG DRARVRAAA
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