Gene BURPS1710b_3783 details

Gene Information

• Locus tag: BURPS1710b_3783
• Symbol: recQ
• ID: 3691173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 4107553
• End bp: 4109496
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637730238
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_335147
• Protein GI: 76810512
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0410934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGACG TGCGACCTTC GTCCACCTTT CGCGGCGGCG ACGTTGGTAA AATTCACGCC 
ACCGCCCCTT TTCGCAGCCC ATCCATCTCC AGATCCATGT CCCGTTCGCT CGAAATTCTC 
AACGAAGTCT TCGGCTATCC CGCCTTCCGA GGTCAACAGG GCGAGATCGT CGAGCACGTT 
GCGGCGGGCG GCGACTGTCT CGTGCTGATG CCCACGGGCG GCGGCAAGTC GCTCTGCTAC 
CAGATTCCGG CGCTCGTGCG CAGCGAAGCG GGCCGCGGCG CGGGCATCGT CGTGTCGCCG 
CTCATCGCGC TGATGCAGGA TCAGGTCGCC GCATTGTCCG AGGTCGGCGT GCGCGCCGCG 
TATCTGAACT CGACGCTGTC GGGGGCCGAG GCGGCCGCGA CCGAACGCGC GCTGCGCGAC 
GGCGACATCG ATCTGCTCTA CGTCGCGCCC GAGCGGCTGA TGACGCCGCG CTTCCTCGAT 
CTGCTCGAGC GCGCGCGCAT CGGGCTTTTC GCGATCGACG AGGCGCACTG CGTATCGCAG 
TGGGGGCACG ATTTCCGGCC CGAGTACATT CAGTTGTCGG TGCTGCACGA GCGCTTTCCG 
GACGTGCCGC GGATCGCGCT GACCGCGACC GCCGATGCGA TCACCCGCGA CGAGATCGTG 
CAGCGTCTGG CGCTCGACGA CGCGCGAATC TTCGTGTCGA GCTTCGACCG GCCGAACATC 
CGCTACCGGA TCGTCGAAAA GGACAACGCG CGCTCGCAGT TGCTCGACTT CATTCGCGCC 
GAGCATACGA ACGCCGACGG TACGACCGAC GCCGGCGTCG TGTACTGCCT GTCGCGCCGC 
AAGGTCGAGG AGACGGCCGA ATGGCTGAAG GCGCAAGGGG TTCGTGCGCT GCCGTATCAC 
GCGGGAATGG AGTTCGAGAT CCGGCAGAAG CACCAGGAGA TGTTCCAGCG CGAGGAAGGG 
GTCGTGATGT GCGCGACGAT CGCATTCGGC ATGGGCATCG ACAAGCCGGA CGTGCGCTTC 
GTCGCACACC TGGATCTGCC GAAGAGCGTC GAAGGCTATT ACCAGGAGAC CGGACGCGCG 
GGGCGCGACG GCCTGCCGGC GAACGCGTGG ATGGCGTACG GGCTCGGCGA CGTCGTTCAG 
CAGCGCAAGA TGATCGACGA ATCGGAAGCC GACGACACGC ACAAGCGTGT CCAGACGTCG 
AAGCTCGACG CGCTGCTCGG GCTGTGCGAG ACGGCATCGT GCCGCCGCGT GCGGCTCCTC 
GCGTATTTCG GCGAGACGAG CGGCCCGTGC GGCAACTGCG ACACCTGCCT CGAGCCGCCG 
GCGACATGGG ACGCGACGCG CGAAGCGCAG ATGGCGCTGT CGTGCGTATT CCGCGCGCAG 
CGCGCAAGCG GCTTCAATTT CGGCGCGAGC CATCTGATCG AAGTGCTGCG CGGTGCGCGG 
ACCGAGAAGG TCCAGCAACG CGGCCACGAC AGTCTCAGCA CGTTCGGCAT CGGCGCCGAG 
TTGTCCGAAG CCGAATGGCG CGCGATCTTC CGGCAGCTCG TCGCGTTCGG CTATCTCGCC 
GTCGACCACG GCGGCTTCGG CGCGCTCGTG CTGACGGAGG CGAGCAAGCC GGTGCTCAAG 
GGCGAGGAGA AGGTCACGCT GCGCCGCTAC GTGAAGCCGG CGCGCACACG GCAGTCCTCC 
GGCCGCAGCG GCGCGCGCGT CGATCCGACG GCCGGCATGA GCGCGCGCGA GCGCGCGTGC 
TGGGAGCGCC TGCGCGCGTG GCGCGCGGAA ACGGCGAAGA GCGACGGCGT GCCTGCGTAC 
GTGATCTTCC ACGACGCGAC GCTCGCGGAG ATCGCGCGCA ACGCGCCCGA ATCGATCGAC 
GATCTGCGCC ATATCCCCGG AATCGGCGCG CGCAAGCTCG ATCGCTTCGG CGACGAGATT 
CTCGAGGTCG TCGAATCGGC CTGA 

 

Protein sequence

MDDVRPSSTF RGGDVGKIHA TAPFRSPSIS RSMSRSLEIL NEVFGYPAFR GQQGEIVEHV 
AAGGDCLVLM PTGGGKSLCY QIPALVRSEA GRGAGIVVSP LIALMQDQVA ALSEVGVRAA 
YLNSTLSGAE AAATERALRD GDIDLLYVAP ERLMTPRFLD LLERARIGLF AIDEAHCVSQ 
WGHDFRPEYI QLSVLHERFP DVPRIALTAT ADAITRDEIV QRLALDDARI FVSSFDRPNI 
RYRIVEKDNA RSQLLDFIRA EHTNADGTTD AGVVYCLSRR KVEETAEWLK AQGVRALPYH 
AGMEFEIRQK HQEMFQREEG VVMCATIAFG MGIDKPDVRF VAHLDLPKSV EGYYQETGRA 
GRDGLPANAW MAYGLGDVVQ QRKMIDESEA DDTHKRVQTS KLDALLGLCE TASCRRVRLL 
AYFGETSGPC GNCDTCLEPP ATWDATREAQ MALSCVFRAQ RASGFNFGAS HLIEVLRGAR 
TEKVQQRGHD SLSTFGIGAE LSEAEWRAIF RQLVAFGYLA VDHGGFGALV LTEASKPVLK 
GEEKVTLRRY VKPARTRQSS GRSGARVDPT AGMSARERAC WERLRAWRAE TAKSDGVPAY 
VIFHDATLAE IARNAPESID DLRHIPGIGA RKLDRFGDEI LEVVESA