| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3764 |
|---|
| Symbol | rplE |
|---|
| ID | 3690967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 4095903 |
|---|
| End bp | 4096442 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637730219 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_335128 |
|---|
| Protein GI | 76812197 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0003555 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTT TTCAAGAGTT TTACAAAGAG AAGGTTGTTC CCGGCCTGAT CGAGAAGTTC
GGCTACAAGT CGGTCATGGA AGTGCCGCGC ATCACCAAGA TCACCCTGAA CATGGGGCTT
GGCGAGGCGG TTGCCGACAA GAAGATCATC GAGAACGCCG TGGGCGATCT GACGAAGATC
GCGGGCCAGA AGCCCGTCGT GACGAAGGCT CGCAAGGCAA TCGCGGGCTT CAAGATCCGT
CAGGGCTACC CGATCGGCGC GATGGTCACG CTGCGTGGCC GCGCGATGTA TGAATTCCTC
GATCGTTTCG TGACGGTTGC CCTGCCCCGC GTGCGCGACT TCCGCGGCGT GTCGGGTCGT
GCTTTCGACG GCCGCGGCAA CTACAACATC GGTGTGAAAG AGCAGATCAT TTTCCCCGAA
ATCGATTACG ACAAGATCGA CGCGCTGCGT GGGCTGAACA TCAGCATCAC GACGACCGCG
AAGACCGACG ACGAAGCGAA GGCTCTGCTC GCCAGCTTCA AGTTCCCGTT CAGAAACTGA
|
|---|
| Protein sequence | MARFQEFYKE KVVPGLIEKF GYKSVMEVPR ITKITLNMGL GEAVADKKII ENAVGDLTKI
AGQKPVVTKA RKAIAGFKIR QGYPIGAMVT LRGRAMYEFL DRFVTVALPR VRDFRGVSGR
AFDGRGNYNI GVKEQIIFPE IDYDKIDALR GLNISITTTA KTDDEAKALL ASFKFPFRN
|
|---|
| |