| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3745 |
|---|
| Symbol | cytc3 |
|---|
| ID | 3691927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 4082676 |
|---|
| End bp | 4084313 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637730199 |
|---|
| Product | cytochrome C |
|---|
| Protein accession | YP_335108 |
|---|
| Protein GI | 76810935 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.110713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGGCG GGTTTTTTTA TGGGCAGCCG CAATCGCGAC ATCCGCATCC GTCAGGTGAG
ACGTGCTCCA CGCGGCTCTG CCGCCAAGTC GTTACGCAGC ACGTCGCGCG ATCGTCATTC
TGCTACAGCC GCGCGATCTT CGTCGGCGGC TGCGGGCCGC ACCCAGCTCT CGATCAGCGC
GTGCGCGTCG TCGAGCCCCG TGCGCTTGAG CGCCGAGAAA AGCTGCACGG TCAGCTTGCC
GGCATAGCCG GCGTCCCGAT ACGCGTCGAG GCTCTTTTGC GTCGCGCGCA GCGCGTTGAT
GCTCTCCTGG CGCGTCAATT TGTCGCACTT CGTCAGCAGC GAGTGAATCG GCTTGCCGGT
CGGCGCGAAC CATTCGATCA TCCGCCGATC GAGCTCGGTG AGCGGCCGGC GCGCATCCAT
CATCAGGATC ATCCCGCAGA GCTGCGGCCG GGTCTGCAGG TACGACGACA GCAATTGCTC
CCAGTGCGCC TTCGCGGCGC CCGGCACTTC CGCATAGCCG TAGCCCGGCA GGTCGACGAG
GTGCGCGACG GGCTCCGCCG CCGGGCCGAC CGAGAAATAG TTGATGTGCT GTGTGCGTCC
CGGCGTCTTC GACGCGAAAG CGAGCCGCTT CTGGTTGCAA AGCACGTTGA TCGCCGTCGA
TTTGCCGGCA TTGGAGCGGC CGGCGAACGC GACTTCGGGT TGCACGGTCG GCGGCAGGTC
ACGCAGGTGG TTGACGGTCG TGAAGAAGCG GGCTTGATGG AGCAAGAAGG CCATGGGACA
GGAGGGCGAC GGGCGGCGCA AGCCGCGCGG TGGAAGGCGG GGAGCCCCGA AGTAGCCCTG
ATGGGCATCA AGGCTTTCAA CGGGGTATTG TACAATACGG CGTATTTGCC GCAGGCGGTG
GAAGCTTCGG AGCGCGCTTC TACGGTAGAC TGGGCGCCGT CGTTTTTTGC AGAACCTCAC
TACTCCCACA AGACGAAACA AGGTGTGCGA ATGAATCGAC TGAGCAAGTC TTTGGTGGTG
CTTCAGTTCG CGGTAGCAGG GCTCGCAGGT TTCATGGCGG AGGCAAGGGC GGCGGATGCG
GCGAAGCCGG ATCTCGACCG AGGCAAGGCA ATCGCGACGC AGGTATGCGC GGCATGCCAC
GGCGTCGACG GCAACAGCGC GACGGGTTCG TTCCCGAAGC TCGCCGGTCA GCATCCCGAT
TATCTCGTCA AGCAATTGCA CGATTTCAAG ACGCAGCCGG GCGCGAAGGG GCCGGTGCGC
GTCAATTCCG TGATGGTCGG ATTCGCAAGC GCGCTGAACG ATCAGGACGC GCGCAACGTC
GCCGCCTATT ACGGATCGCA GTCGGCCAAG CCGGGCGCCG CGCGCAACGC GGCCACCGTG
CCCGTCGGGC AGAAGATCTA TCGCGGCGGC ATCGCCGAGA AGGGCGTGCC CGCCTGCGCG
AGCTGCCACG GGCCGACTGG GCAGGGGATT CCGGTCCAGT ACCCGCGGTT GTCGGGGCAA
TGGGCCGACT ATACCGTCGC GCAGTTGACC GCGTTCCAGC AAGGCACGCG CAGCAACGAC
GCGATGCATC AGATCGCGTT GCGGCTGACG GACAGCGAGG TCAAGGCCGT CGCCGATTAC
ATCGCCGGCC TGCATTGA
|
|---|
| Protein sequence | MNGGFFYGQP QSRHPHPSGE TCSTRLCRQV VTQHVARSSF CYSRAIFVGG CGPHPALDQR
VRVVEPRALE RREKLHGQLA GIAGVPIRVE ALLRRAQRVD ALLARQFVAL RQQRVNRLAG
RREPFDHPPI ELGERPARIH HQDHPAELRP GLQVRRQQLL PVRLRGARHF RIAVARQVDE
VRDGLRRRAD REIVDVLCAS RRLRRESEPL LVAKHVDRRR FAGIGAAGER DFGLHGRRQV
TQVVDGREEA GLMEQEGHGT GGRRAAQAAR WKAGSPEVAL MGIKAFNGVL YNTAYLPQAV
EASERASTVD WAPSFFAEPH YSHKTKQGVR MNRLSKSLVV LQFAVAGLAG FMAEARAADA
AKPDLDRGKA IATQVCAACH GVDGNSATGS FPKLAGQHPD YLVKQLHDFK TQPGAKGPVR
VNSVMVGFAS ALNDQDARNV AAYYGSQSAK PGAARNAATV PVGQKIYRGG IAEKGVPACA
SCHGPTGQGI PVQYPRLSGQ WADYTVAQLT AFQQGTRSND AMHQIALRLT DSEVKAVADY
IAGLH
|
|---|
| |