| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3565 |
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| Symbol | pcaF |
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| ID | 3690069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 3890325 |
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| End bp | 3891527 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637730020 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_334930 |
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| Protein GI | 76809933 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00704584 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG CATTCCTGTG TGACGCAATC CGCACGCCCA TCGGCCGCTA CGGCGGCGCG
CTGGCGCCGG TGCGGGCCGA CGACCTCGGC GCGGTGCCGC TCAAGGCGCT CGTCGAGCGC
AACCGCGACG TCGACTGGGC CGCCGTCGAC GACGTGATCT ACGGCTGCGC GAACCAGGCC
GGCGAGGACA ACCGCAACGT CGCGCGCATG TCGCTGCTGC TCGCCGGCTT GCCGCACGCC
GTGCCCGGCG CGACGATCAA CCGCCTCTGC GGCTCCGGGA TGGACGCGAT CGGCCTCGCC
GCGCGCGCGA TCAAGGCGGG CGAGGCGAGC CTGATGATCG CCGGCGGCGT CGAGAGCATG
AGCCGCGCGC CGTTCGTGAC CGGCAAGGCG ACGAGCGCGT TCTCGCGCCA GGCCGAGATC
TTCGATACGA CCATCGGCTG GCGCTTCGTC AATCCGCTGA TGAAACAGCG GTACGGCGTC
GATTCGATGC CGGAGACGGC CGAAAATGTC GCGACCGATT ACCGCGTGAG CCGCGCCGAT
CAGGACGCGT TCGCGCTGCG CAGCCAGCAG AAGGCGGCGC GCGCGCAAGC CGACGGCACG
CTCGCGCAGG AGATCGCGCC GGTGACGATC GCGCAGAAGC AGGGCGAGCC GCTCGTCGTG
GCGCGCGACG AGCATCCGCG CGAGACGACC CTCGAGGCGC TCGCGAAGCT CAAGGGCGTG
GTGCGCCCGG ACGGCACGGT GACGGCGGGC AACGCGTCGG GCGTGAACGA CGGTGCGTGC
GCGCTGCTGG TGGCGAGCGA GGCGGCGGCG CGCCGCCACG GGCTCGTGCC GCGCGCGCGT
GTGCTGGGGA TCGCGACGGC GGGCGTGGAG CCGCGGGTGA TGGGGATCGG CCCGGCGCCG
GCGACGCAGA AGCTGCTCGC GCGGCTCGGG ATGACGCTCG ACCAGTTCGA CGTGATCGAG
CTGAACGAGG CGTTCGCGTC GCAGGGGCTC GCGGTGCTGC GGCTGCTGGG CGTCGCGGAC
GACGATGCGC GGGTGAATCC GAACGGCGGC GCGATCGCGC TCGGGCATCC GCTTGGCGCG
TCGGGCGCGC GGCTCGTGAC GACCGCCACG TATCAGTTGC ACCGCACGGG CGGCCGCTTC
GCGCTCTGCA CGATGTGCAT CGGCGTCGGC CAGGGCATCG CGATCGCGAT CGAGCGCGTG
TGA
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| Protein sequence | MTEAFLCDAI RTPIGRYGGA LAPVRADDLG AVPLKALVER NRDVDWAAVD DVIYGCANQA
GEDNRNVARM SLLLAGLPHA VPGATINRLC GSGMDAIGLA ARAIKAGEAS LMIAGGVESM
SRAPFVTGKA TSAFSRQAEI FDTTIGWRFV NPLMKQRYGV DSMPETAENV ATDYRVSRAD
QDAFALRSQQ KAARAQADGT LAQEIAPVTI AQKQGEPLVV ARDEHPRETT LEALAKLKGV
VRPDGTVTAG NASGVNDGAC ALLVASEAAA RRHGLVPRAR VLGIATAGVE PRVMGIGPAP
ATQKLLARLG MTLDQFDVIE LNEAFASQGL AVLRLLGVAD DDARVNPNGG AIALGHPLGA
SGARLVTTAT YQLHRTGGRF ALCTMCIGVG QGIAIAIERV
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