| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3524 |
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| Symbol | ispB |
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| ID | 3690448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 3840370 |
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| End bp | 3841362 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637729979 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_334895 |
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| Protein GI | 76809882 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.438623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCGA CTGCCACCCC TTCCCTCAGC GCCGCCCACC TGCTCGCACC GATCGCAAGC
GACATGGAGC AGGTGAATCG CGTCATTCGG CAAAGCCTCG CGTCCGACGT GCTGCTGATC
AATCAGATCG CCGAGTACAT CATCGGCGCG GGCGGCAAAC GGCTGCGGCC GGCGCTTCTT
CTGCTCGTCG CGGGCGCGCT CGGCGAAAAC ACGAACCAGA AGCACGTGCT CGCGGCCGTC
GTCGAATTCA TCCATACGGC GACGCTGCTG CACGACGACG TCGTCGACGA ATCCGAGCTG
CGGCGCGGCC GCAAGACTGC GAACGCACTG TTCGGCAATG CGGCGAGCGT GCTTGTCGGC
GATTACCTCT ATTCGCGCTC GTTCGAGATG ATGGTGGGCG TCGGCAAGAT GCGCGTGATG
GAAATCCTGT CCGAAGCGAC GACGATCATC TCCGAAGGCG AAGTGCTGCA ATTGCTGAAC
ATGCACGATG CGGACGTCGA CGAAGCCCGC TACATGCAGG TGATCCGCTA TAAGACCGCG
AAGCTGTTCG AAGCGGCCGC GCGGCTCGGC GCGGTGCTCG CCGGCGCCGA CGCGCCGACG
GAAGCCGCCG CGGCCGAGTA CGGCCGCCGG ATCGGCACCG CGTTCCAGAT CATGGACGAC
TGGCTCGACT ATGCGGGCAC CGCCGAATCG ATGGGCAAGA ACGCCGGCGA CGACCTGCGC
GAAGGCAAGC CGACGCTGCC GCTCATCTAT CTGATCGAGC GCGGCACGCC CGAGCAGTCG
ACACTCGCGC GCGAAGCGAT CGAGCACGGC GGTACCGATC GCTTCGACAC GATTTTCGAC
GCGATCACGC GTTCGGGCGC GCTCGACCAT ACGCTCGAAT GCGCTCGCCA AGAAGCGCAG
GCGGCCGCAG CAGCAATTTC TTCATTTCCC TCTTCCAATT TCAAAGAGAG CCTGCTAGAA
TTATGTTCTT ACTCGACGTC ACGTCAGTCT TGA
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| Protein sequence | MSSTATPSLS AAHLLAPIAS DMEQVNRVIR QSLASDVLLI NQIAEYIIGA GGKRLRPALL
LLVAGALGEN TNQKHVLAAV VEFIHTATLL HDDVVDESEL RRGRKTANAL FGNAASVLVG
DYLYSRSFEM MVGVGKMRVM EILSEATTII SEGEVLQLLN MHDADVDEAR YMQVIRYKTA
KLFEAAARLG AVLAGADAPT EAAAAEYGRR IGTAFQIMDD WLDYAGTAES MGKNAGDDLR
EGKPTLPLIY LIERGTPEQS TLAREAIEHG GTDRFDTIFD AITRSGALDH TLECARQEAQ
AAAAAISSFP SSNFKESLLE LCSYSTSRQS
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