Gene BURPS1710b_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3496 
Symbolmpl 
ID3688806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3812590 
End bp3814074 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content68% 
IMG OID637729951 
ProductUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 
Protein accessionYP_334867 
Protein GI76809096 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCCG GCAACCGGCG CGACGTGCGG CCGGCTGCCG ATTTCAACTA CGCCCACGCG 
GCGCGAAGCT CTATGCATAT CCACATTCTC GGCATCTGCG GCACCTTCAT GGGCGGTCTG
GCCGTGCTCG CACGCGCGGC GGGGCATACC GTGACCGGCT GCGACGCGGG CGTCTATCCG
CCAATGAGCA CGCAACTCGA GGCGCAGGGT ATCCAGCTGA TCGAAGGCTA CGGCGCCGAA
CAGATCGATC TGAAGCCCGA TCTGTTCGTG ATCGGCAACG TGGTCTCGCG CGGCAACCCG
CTGATGGAGG CGATTCTCGA TCGCGGGCTG CCGTATGTAT CGGGCCCGCA ATGGCTCGGC
GAGCATGTGC TGGCGGGTAA GTGGGTGCTC GCTGTCGCCG GTACGCACGG CAAGACGACG
ACGAGCTCGA TGCTCGCGTG GGTACTGGAA GACGCCGGCC TGAATCCGGG TTTCCTGATC
GGTGGCGTGC CGCTGAATTT CGGCGTGTCC GCACGGTTGA CCGATTCGAG CTTCTTCGTG
ATCGAGGCGG ACGAGTACGA CACGGCGTTT TTCGACAAGC GCTCGAAATT CGTCCATTAC
CGGCCGCGGA CCGCGATCCT GAACAATCTC GAATTCGATC ATGCGGACAT CTTCCCGGAT
CTCGCCGCGA TCGAGACGCA ATTCCATCAT CTGGTGCGCA CCGTGCCGGG CGTCGGCCGG
CTCGTGACGA ACGGCCGCGA CGACGCGCTC GAGCGCGTGC TGTCGCGCGG CTGCTGGAGC
GACGTCGAGC GCTTCGGTGT CGACGGCGGC TGGCAGGCGT TGCCTGTCGA GAATGGCGTG
CCGGTGGACG GGCGTTTCGC GGTGTATTGG CGCAGCGAGC GCGTCGGCGC CGTCGATTGG
CAGGTGCAGG GCGAGCACAA TCGGATGAAC GCGCTCGCGG CGATCGCCGC CGCGCGCCAC
GTCGGCGTGC CGCCCGCGCA GGCGGCCGCC GCGCTGGCCG CGTTCCGCAA CGTCAAGCGA
CGGATGGAGG TGCGCGGCAG CGTCGACGGG GTCACCGTCT ACGACGATTT CGCTCACCAC
CCCACCGCGA TCGAAACGAC GATTGCCGGC CTTCGTACAC GCATCGGTCG CGAAAACACC
CGCATCCTCG CGGTGCTGGA GCCGCGGTCG AACACGATGA AGCTCGGCGT GATGAAGGCG
CAACTGCCGG CGAGCCTGGC CGATGCCGAT CTCGTGTTCG GCTACGGCGC GCCGAGCGGC
CGCGACGCGC TCGGCTGGAG CCTGCCCGAC GCGCTTGCGC CGCTTGGCGG CAAGGCGCGC
GCGTTCGACG ATCTGCATGC GCTCGTGAAG GCCGTGACCG CCTCGGCACG GCCGGGCGAC
CACGTGCTCG TGATGAGCAA CGGCGGCTTC GGCGGCGTGC ACCAGAAGCT GCTCGACGCG
CTGTCCGCCC GCGGCGACGC GGCGCCGGCC CGGAGCGGCG CGTGA
 
Protein sequence
MFSGNRRDVR PAADFNYAHA ARSSMHIHIL GICGTFMGGL AVLARAAGHT VTGCDAGVYP 
PMSTQLEAQG IQLIEGYGAE QIDLKPDLFV IGNVVSRGNP LMEAILDRGL PYVSGPQWLG
EHVLAGKWVL AVAGTHGKTT TSSMLAWVLE DAGLNPGFLI GGVPLNFGVS ARLTDSSFFV
IEADEYDTAF FDKRSKFVHY RPRTAILNNL EFDHADIFPD LAAIETQFHH LVRTVPGVGR
LVTNGRDDAL ERVLSRGCWS DVERFGVDGG WQALPVENGV PVDGRFAVYW RSERVGAVDW
QVQGEHNRMN ALAAIAAARH VGVPPAQAAA ALAAFRNVKR RMEVRGSVDG VTVYDDFAHH
PTAIETTIAG LRTRIGRENT RILAVLEPRS NTMKLGVMKA QLPASLADAD LVFGYGAPSG
RDALGWSLPD ALAPLGGKAR AFDDLHALVK AVTASARPGD HVLVMSNGGF GGVHQKLLDA
LSARGDAAPA RSGA