Gene BURPS1710b_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3290 
SymbolwcbM 
ID3690098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3600078 
End bp3600770 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID637729745 
ProductWcbM 
Protein accessionYP_334661 
Protein GI76808773 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAG CGATCATCTT GGCCGGAGGG TTCGGTACGC GCTTGCGCAC GGTCGTCTCC 
GACGTTCCCA AGCCGATGGC GCCTATTGCC GGCAGGCCAT TTCTTGAAAT CCTCTTGACG
CGTTTGAGCG AAAAGAAGTT TTCTCGGGTG GTCCTGTCCG TTGGCTTCAT GGCCGAGAAA
ATCATGAGCC ATTTCGGTGA TCGCTTCGCC GGAATCGACC TCGCGTATTC AGTCGAGAGC
GATCCGTTGG GTACGGGAGG CGCACTGAAG GCAACGTTGC CGTACTGCGA GGGCGACCAC
GCGTTCGTGT TCAACGGCGA TACGTATCTG GATCTCGAAG TCGACGAACT GGACGACGGT
TGGCAGACGG GCGGATTCCC GACGATCGTG GCCCGGCAGG TGCCGGATAC GGGGCGATAC
GGCCGCCTCG TCGTCGACGG CGGTCGGGTG ACGGGTTTTG CCGAAAAGGG CGTTTCGGGA
CCGGGCTTGA TCAACGCAGG TTGCTATGTC CTGCCGAAGG ACATTCTTGC CGGCGAGACG
GCGGAGACGT TCTCGTTCGA AACCGATTTC ATGTCGTCCG CAGTCCAGTC TCGCAGGTTC
GACGTTTTCG TGACGCGTGG GCAGTTTATC GATATCGGCG TTCCCGAGGA CTTTTACCGC
GCTCAAGACG AGCTTTCCGG AATCTGCAAG TGA
 
Protein sequence
MREAIILAGG FGTRLRTVVS DVPKPMAPIA GRPFLEILLT RLSEKKFSRV VLSVGFMAEK 
IMSHFGDRFA GIDLAYSVES DPLGTGGALK ATLPYCEGDH AFVFNGDTYL DLEVDELDDG
WQTGGFPTIV ARQVPDTGRY GRLVVDGGRV TGFAEKGVSG PGLINAGCYV LPKDILAGET
AETFSFETDF MSSAVQSRRF DVFVTRGQFI DIGVPEDFYR AQDELSGICK