Gene BURPS1710b_3257 details

Gene Information

• Locus tag: BURPS1710b_3257
• Symbol: opcL
• ID: 3690946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 3562303
• End bp: 3562815
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637729712
• Product: OmpA family outer membrane protein
• Protein accession: YP_334629
• Protein GI: 76810557
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGTCGA AGAAACTTCG TCTGGCGTTC GCGATGCTGA TGATCGGCGC GCTCGCGGCA 
TGCAAGTCGG GCGTGAAGCT CGACGAGCAC GCGAACCAGG GCGACGCGGT CAGCACGCAA 
CCGAATCCCG AAAACGTCGC GCAGGTGACC GTCGATCCGC TGAACGATCC GAACAGCCCG 
CTCGCGAAGC GCAGCGTGTA CTTCGATTTC GACAGCTACT CGGTGCAGGA CCAATACCAG 
GCGCTGCTGC AGCAACACGC GCAATACCTG AAGAGCCATC CGCAACGCCA CATCCTGATC 
CAGGGCAACA CCGACGAGCG CGGCACGAGC GAGTACAACC TCGCGCTCGG CCAAAAGCGT 
GCGGAAGCCG TGCGCCGCGC GCTGTCGCTG CTCGGCGTCG GGGATGCGCA GATGGAAGCC 
GTGAGTCTCG GCAAGGAAAA GCCGGTTGCG CTCGGCCACG ACGAAGCGTC GTGGGCGCAG 
AACCGCCGTG CGGACCTCGT CTATCAACAG TAA 

 

Protein sequence

MMSKKLRLAF AMLMIGALAA CKSGVKLDEH ANQGDAVSTQ PNPENVAQVT VDPLNDPNSP 
LAKRSVYFDF DSYSVQDQYQ ALLQQHAQYL KSHPQRHILI QGNTDERGTS EYNLALGQKR 
AEAVRRALSL LGVGDAQMEA VSLGKEKPVA LGHDEASWAQ NRRADLVYQQ