Gene BURPS1710b_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3221 
Symbol 
ID3691744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3532784 
End bp3533788 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID637729676 
ProductD-lactate dehydrogenase 
Protein accessionYP_334593 
Protein GI76809064 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000330927 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGTGA TTCTTTTCAG CAGCCGGCAG TACGACCACG ATTCGTTCGA TGCCGCCAAC 
CAATCGTTCG GCTACCGGCT GCACTTCCAG CCTTCCCATC TCGACGCGGA GACGGCGATC
CTCGCGCGCG GCTATGAAGT CGTGTGCCCG TTCGTCAACG ACACGCTCGA CGCCGCCGTG
CTCGAGACGC TCGCCGCGGG CGGCACGCGC GTCATCGCGC TGCGCTCGGC CGGCTTCAAC
CACGTCGATC TCGCGGCAGC CGCGCGGCTC GGGCTCACCG TCGTGCGCGT GCCCGCCTAT
TCGCCGCATG CGGTGGCCGA GCACGCGGTC GCGCTGATCC TCGCGCTGAA CCGGCGCCTG
CCGCGCGCGG TCGCGCGCAC CCGCGAAGGC GACTTCTCCC TCAACGGGCT GCTCGGCTTC
GATCTGTTCG GCAAGACGGT CGGCGTGATC GGCACGGGGC TCATCGGCAG CGTGTTCGCG
CGGATCATGA CGGGCTTCGG GATGCGCGTG CTCGCACATT CGCTGCCGCC GCACGACGAT
GCGCTGATCG CGCTCGGCGT GCGCTACGTG CCGCTCGACG CGCTGCTCGC CGAAGCGGAC
ATCGTGAGCC TGCATTGCCC GCTGATGCCC GCGACCCATC ACATGATCGA CGCCGATGCG
CTCGCGCGGA TGAAGCCGGG CGCGATGCTG ATCAACACGA GCCGCGGCGG CCTCGTCGAC
ACCCAGGCGC TGATCGACGC GCTGAAGACG GGCCAGCTCG GCCATCTCGG GCTCGACGTC
TACGAAGAGG AAAGCGGGCT GTTCTTCGAA GACCATTCGG ACCGACCGCT GCAGGACGAC
GTGCTCGCGC GGCTGCTCAC GTTTCCCAAT GTGATCGTCA CGTCGCACCA GGCGTTCTTC
ACGCGCGAGG CGCTCGCGGA GATCGCGCAC ACGACGCTGT CGAACATCCG CGCGTGGCAG
GACGGCGCGC CGCAGAACGT CGTCGACGCC GGGCGGCCCG GCTGA
 
Protein sequence
MRVILFSSRQ YDHDSFDAAN QSFGYRLHFQ PSHLDAETAI LARGYEVVCP FVNDTLDAAV 
LETLAAGGTR VIALRSAGFN HVDLAAAARL GLTVVRVPAY SPHAVAEHAV ALILALNRRL
PRAVARTREG DFSLNGLLGF DLFGKTVGVI GTGLIGSVFA RIMTGFGMRV LAHSLPPHDD
ALIALGVRYV PLDALLAEAD IVSLHCPLMP ATHHMIDADA LARMKPGAML INTSRGGLVD
TQALIDALKT GQLGHLGLDV YEEESGLFFE DHSDRPLQDD VLARLLTFPN VIVTSHQAFF
TREALAEIAH TTLSNIRAWQ DGAPQNVVDA GRPG