Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3185 |
Symbol | ompW |
ID | 3691845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 3491897 |
End bp | 3492721 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637729640 |
Product | OmpW family outer membrane protein |
Protein accession | YP_334557 |
Protein GI | 76810803 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0684356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC TGATTGCCGC GTGCGTCGTT GCCGGTGCAT CGACGGGCGC TTTCGCGCAG CAGGCGGGCG ACTTGGTCGC GACGCTCGGC TGGCTCCACG TGATGCCGCA GGATTCGACC AATGGCCTTA CCACCAACGT CGTGAACTCG CCGATCAACG GGCCGCTGCG GCTGCCCGGC TCGTTCACGT CGCCGGGCAC GAGCCTCACG GTCAACAATG CGGACACGGT GGGCCTCACG TTCACGTACT TCTTCACCGA TCACATCGCG GTGACGTCCG TGCTCGGGAT TCCGCCGGAG TTCGCGTTGA CGGGGCACGG CGTGATCAGG CCGCCCGGTC CGTCGGGCTC GCTCGGCAAC GTCGATCTCG ACAAGCCTGC GAATCAGCCC GCCGTGAAGA ACGCGCGGCA ATGGAGTCCG ACGATCATCC TGAACTACTA CTTCAACGCG CCGAGCGCCA AGTTCCGGCC GTTCGTCGGC ATCGGCGTCG CATACAGCTG GTTCTCGAAC ATCGAGCTCA ACGGCAATTT CGCGAAGGAC ATCAACGACA ACCTCGGCAG CGTGCTTGCC GCGGGCGCCG GCAAGCCGGA GCCGACGTCG GTCGAGGGCA AGGCGTCGTC GTCGTTCACG CCGGTCTACA ACATCGGCGC GAGCTACGCG ATCGCGAAAC ACTGGGCACT GACGGCGACG CTGTCGTACA TGCCGCTCAA GACGTATTCG TCGCTCGTCA TCAAGGCCGC GGACGGCACG ACGCTCGCGA CGACGCGCAC GAGGCTGAAG GCCGATCCGC TCATCACGTT CGTCGGGATT TCATACAAGT TCTGA
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Protein sequence | MKKLIAACVV AGASTGAFAQ QAGDLVATLG WLHVMPQDST NGLTTNVVNS PINGPLRLPG SFTSPGTSLT VNNADTVGLT FTYFFTDHIA VTSVLGIPPE FALTGHGVIR PPGPSGSLGN VDLDKPANQP AVKNARQWSP TIILNYYFNA PSAKFRPFVG IGVAYSWFSN IELNGNFAKD INDNLGSVLA AGAGKPEPTS VEGKASSSFT PVYNIGASYA IAKHWALTAT LSYMPLKTYS SLVIKAADGT TLATTRTRLK ADPLITFVGI SYKF
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