Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3162 |
Symbol | rfbA |
ID | 3690308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 3470915 |
End bp | 3471853 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637729617 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_334534 |
Protein GI | 76811752 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTCGAA ACGAACTACG CGCAACGCGC GTAAAGGTTG AACCGATGGC GCGCAAGGGC ATTATTCTGG CCGGCGGTTC CGGCACGCGG CTGTATCCGA TCACGCATGC GGTGTCGAAG CAGCTGTTGC CGGTCTACGA CAAGCCGATG ATCTATTACC CGCTGTCGAC GCTGATGGTG GCGGACATTC GCGATGTGCT GATCATCTCG ACGCCGCAGG ACACGCCGCG CTTCGAGGCG ATGCTGGGTG ACGGCAGCCA GTGGGGGATG AACATCCGCT ACGCGGTGCA GCCGTCGCCG GACGGGCTCG CGCAGGCGTT CGTGATCGGC CGGGAATTCG TCGGCCGCGA TCCGTCGACG CTGATTCTCG GCGACAACAT CTTCTATGGC CACGATCTCG CGAAGCAACT CGATCGGGCA TCGGCGCGGC AGGCGGGCGC GACGGTGTTC GCATACCACG TGCACGATCC GGAGCGCTAC GGCGTCGTCG AGTTCGACGG CGAATTCCGC GCGCTGTCGA TCGAGGAGAA GCCCGCGAAG CCGCGCTCGA ACTACGCGGT GACGGGGCTG TACTTCTACG ACAACCAGGT GTGCGACATC GCGGCGGACA TCAAGCCGTC CGCGCGCGGC GAGCTGGAGA TCACGGACGT GAATTCCCGC TATCTCGCCG CGGGTTTGCT CGACGTCGAG ATCATGGGCC GCGGCTACGC GTGGCTCGAT ACCGGCACGC ACGATTCGCT GATCGAGGCG GCGACGTTCA TCGCGACGCT GCAAAAGCGC CAGGGGCTCG TCGTCGCGTG TCCGGAGGAG ATCGCGTATC GGCGGCAGTG GATCGACGCG GAACAACTGC TCAAGCTCGC ACAGCCTTTG TCGAAAAATG GCTATGGCCA GTACCTGAAA AACATTCTTA CGGATCAAGT CGCATGGCCA TCCAAGTAA
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Protein sequence | MGRNELRATR VKVEPMARKG IILAGGSGTR LYPITHAVSK QLLPVYDKPM IYYPLSTLMV ADIRDVLIIS TPQDTPRFEA MLGDGSQWGM NIRYAVQPSP DGLAQAFVIG REFVGRDPST LILGDNIFYG HDLAKQLDRA SARQAGATVF AYHVHDPERY GVVEFDGEFR ALSIEEKPAK PRSNYAVTGL YFYDNQVCDI AADIKPSARG ELEITDVNSR YLAAGLLDVE IMGRGYAWLD TGTHDSLIEA ATFIATLQKR QGLVVACPEE IAYRRQWIDA EQLLKLAQPL SKNGYGQYLK NILTDQVAWP SK
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