| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3106 |
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| Symbol | ubiD |
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| ID | 3691824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 3413177 |
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| End bp | 3414913 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637729561 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_334479 |
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| Protein GI | 76808793 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTGTT ACGGGTCGGA ATCGGAAGCC GCGTGCCGTC TGGCGTCCGG ATCCGCCGCT
ATTTTTTACC TTTTCGTCGC CTGGCCGTGC GGCCGGGTAA AATCGGCGCT CGTTTTCGGG
CGGGCTCGTG CCCGCCCTCA TCGCCGCCGC CTGTCGCGCG CGGCCCGGAC ATTCTTCATG
AAATACAAAG ATTTACGCGA TTTCATCCAT GGCCTCGAGC AGCGCGGCGA GTTGCGGCGC
GTCACCCAGC CCGTATCGCC CGTCCTCGAA ATGACCGAAC TCTGCGACCG CGTGCTGCGC
GCGGGCGGCC CCGCGCTCCT GTTCGACGCG CCGGCCGGCC ACCGGTTTCC GGTGCTCGGC
AATCTGTTCG GCACGCCGCG GCGCGTCGCG CTCGGCATGG GCGTCGACGC CGACGACGAA
GCGGCGCTCG CGTCGCTGCG CGACATCGGC CGCCTGCTGT CCGCGCTCAA GGAGCCGGAC
CCGCCGAAGC GCCTGAAGGA CGCGGGCAAG TTGCTGTCGC TCGCGAAGGC CGTGTGGGAC
ATGAGCCCGA AGACGGTCTC CGCGCCGCCG TGCCAGGAGA TCGTCTGGGA AGGCGACGAC
GTCGATCTGC ACAAGCTGCC GATCCAGACC TGCTGGCCGG GCGACGCCGG GCCGCTGCTC
ACGTGGGGCC TGACCGTCAC GCGCGGGCCG AACAAGACGC GCCAGAATCT GGGCATCTAC
CGGCAGCAAC TGATCGGACG CAACAAACTG ATCATGCGCT GGCTCGCGCA TCGCGGCGGC
GCGCTCGATT TCCGCGAATT CGCGCTGAAG CATCCGGGCC AGCCCTATCC CGTCGCCGTC
GTGCTCGGCG CCGATCCGGC GACGATGCTC GGGGCCGTCA CGCCCGTGCC CGATTCGCTG
TCCGAATACC AGTTCGCGGG CCTGCTGCGC GGCGCGCGCA CCGAGCTCGC GAAATGCGTG
ACGCCCGGCG TCGACGCGCT GCAGGTGCCG GCGCGCGCGG AAATCGTGCT CGAAGGCTTC
ATCCACCCGC AGCAAGGCGC GCCCGCGCCT GCGCCCGAAG GCGCGCCGCC GCGGCCGGCC
GCGGGCGCGG CGGCCGGCTA CGAGCATGCG CTCGAGGGCC CGTACGGCGA TCACACCGGC
TACTACAACG AGCAGGAATG GTTTCCGGTC TTCACGGTCG AGCGGATCAC GATGCGCCGC
GACGCGATCT ACCACTCGAC GTACACCGGC AAGCCGCCCG ACGAGCCGGC CGTGCTCGGC
GTCGCGCTGA ACGAAGTGTT CGTGCCGCTG CTGCAGAAGC AGTTCGCCGA GATCACCGAT
TTCTATCTGC CGCCCGAGGG TTGCAGCTAC CGGATGGCGA TCGTCCAGAT GAAGAAGAGT
TACGCGGGAC ACGCGAAGCG GGTGATGTTC GGCGTCTGGA GCTTCCTGCG GCAGTTCATG
TATACGAAGT TCATCGTGGT CGTCGACGAG GACGTGAACG TGCGCGACTG GAAGGAAGTG
ATCTGGGCGA TCACGACGCG CGTCGATCCG GCGCGCGACA CGGTGCTCGT CGAGAACACG
CCGATCGACT ATCTCGACTT CGCGTCGCCC GTCGCCGGCC TCGGCTCGAA GATGGGGCTC
GATGCGACCA ACAAGTGGCC GGGCGAAACC CAGCGCGAAT GGGGCCGGCC GATCGAGATG
GACGCCGCCG TGAAGGCGCG CGTCGATCGT CTGTGGACGG AGATCGGCCT GTCGTGA
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| Protein sequence | MICYGSESEA ACRLASGSAA IFYLFVAWPC GRVKSALVFG RARARPHRRR LSRAARTFFM
KYKDLRDFIH GLEQRGELRR VTQPVSPVLE MTELCDRVLR AGGPALLFDA PAGHRFPVLG
NLFGTPRRVA LGMGVDADDE AALASLRDIG RLLSALKEPD PPKRLKDAGK LLSLAKAVWD
MSPKTVSAPP CQEIVWEGDD VDLHKLPIQT CWPGDAGPLL TWGLTVTRGP NKTRQNLGIY
RQQLIGRNKL IMRWLAHRGG ALDFREFALK HPGQPYPVAV VLGADPATML GAVTPVPDSL
SEYQFAGLLR GARTELAKCV TPGVDALQVP ARAEIVLEGF IHPQQGAPAP APEGAPPRPA
AGAAAGYEHA LEGPYGDHTG YYNEQEWFPV FTVERITMRR DAIYHSTYTG KPPDEPAVLG
VALNEVFVPL LQKQFAEITD FYLPPEGCSY RMAIVQMKKS YAGHAKRVMF GVWSFLRQFM
YTKFIVVVDE DVNVRDWKEV IWAITTRVDP ARDTVLVENT PIDYLDFASP VAGLGSKMGL
DATNKWPGET QREWGRPIEM DAAVKARVDR LWTEIGLS
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