| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3016 |
|---|
| Symbol | citA |
|---|
| ID | 3690329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 3323424 |
|---|
| End bp | 3324764 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637729471 |
|---|
| Product | citrate-proton symporter |
|---|
| Protein accession | YP_334394 |
|---|
| Protein GI | 76808965 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGCC CCCGGCGGTC GCGGCGCAGC CTTATCGAGA GAGACATGTC TACCGCGTCC
CCCGCAATCC AGCAGGAATC CAAAGCCAGG ACCGTGTTCC GCGTCGTCAG CGGCAACTTT
CTGGAGATGT ACGACTTCAT GGTCTACGGC TACTACGCGT CCGCGATCGC CAAGACCTAC
TTCCCGAGCG GCAACGCGTT CGCCTCGCTG ATGCTGTCGC TGTCGGTGTT CGGCGCGGGC
TTTCTGATGC GTCCCGTCGG CGCGATCGTG CTCGGCGCGT ACATCGACCA TCACGGCCGC
CGCAAGGGCC TCATCCTGAC GCTCGCGTTG ATGGCGCTCG GCACGCTGAC CGTCGCGACG
ATTCCGGGCT ACACGACGAT CGGCGTGCTC GCGCCGATTC TCGTGCTGCT CGGCCGCCTG
CTGCAGGGTT TCTCGGCGGG CGTCGAGCTG GGCGGCGTAT CGGTGTATCT GTCCGAGATC
GCGACGAAGG GCAACAAGGG CTTCTATACG TCGTGGCAGT CGGGCAGCCA GCAGGTGGCC
GTGGTGTTCG CCGCGTTCGT CGGCGTGCTG CTGAACCGCG CGCTGCCTGT CGAGCAAATG
ACGTCGTGGG GCTGGCGCAT CCCGTTCCTG ATCGGCTGCC TGATCGTGCC GTTCCTGTTC
CTGATCCGCC GCTCGCTGAA GGAGACCGAC GAGTTCCTCG CGAAGCGCCG CCGCCCGAGC
ATGGGCGAGA TCATGAAGTC GATGCTCGAG AACTGGGGCG TGGTGCTGGC CGGCATGGGG
ATGGTCATCA TGACGACCGT GTCGTTCTAC ATGATCACCG CGTACACGCC GACTTTCGGC
AAGGAAGTGC TGCATCTGTC GGCGATCGAC GCGCTCGTCG TGACCGTTTG CGTCGGGCTG
TCGAACCTGG TCTGGCTGCC GCTGTCGGGC GCGCTGTCCG ATCGGATCGG CCGCCGCCCG
GTGCTGATCG CGTTCACCGC GCTCACGATC CTCACCGCGT ATCCGGCGAT GCAGTGGCTC
GTCGGTTCGC CGTCGTTCCT GCGGCTGTTG GGCGTCGAGC TGTGGCTGTC GTTCCTGTAC
GGCTCGTACA ACGGCGCGAT GGTCGTCGCG CTGACCGAGG TGATGCCGGC CGACGTGCGC
ACCGCGGGCT TCTCGCTCGC TTACAGCCTC GCGACGACGA TCGGCGGCTT CACGCCGGCG
ATCTCGACGC TGCTGATTCA CGAGACCGGC AACAAGGCGG CGCCGGGCCT CTGGCTCGGC
CTCGCCGCGA TCTGCGGGCT GATCGCGACG CTCGTGCTGT ACCGGTCGCC TGAAGCGCGC
AATCAATACA AGACGACTTG A
|
|---|
| Protein sequence | MRRPRRSRRS LIERDMSTAS PAIQQESKAR TVFRVVSGNF LEMYDFMVYG YYASAIAKTY
FPSGNAFASL MLSLSVFGAG FLMRPVGAIV LGAYIDHHGR RKGLILTLAL MALGTLTVAT
IPGYTTIGVL APILVLLGRL LQGFSAGVEL GGVSVYLSEI ATKGNKGFYT SWQSGSQQVA
VVFAAFVGVL LNRALPVEQM TSWGWRIPFL IGCLIVPFLF LIRRSLKETD EFLAKRRRPS
MGEIMKSMLE NWGVVLAGMG MVIMTTVSFY MITAYTPTFG KEVLHLSAID ALVVTVCVGL
SNLVWLPLSG ALSDRIGRRP VLIAFTALTI LTAYPAMQWL VGSPSFLRLL GVELWLSFLY
GSYNGAMVVA LTEVMPADVR TAGFSLAYSL ATTIGGFTPA ISTLLIHETG NKAAPGLWLG
LAAICGLIAT LVLYRSPEAR NQYKTT
|
|---|
| |