Gene BURPS1710b_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2993 
SymbolrpsA 
ID3690610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3297284 
End bp3298996 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content62% 
IMG OID637729450 
Product30S ribosomal protein S1 
Protein accessionYP_334373 
Protein GI76809559 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACC TGCAAACCTC CAACCCGAAT ACCGAATCCT TTGCGGCTCT GTTCGAAGAG 
TCGCTGACCC GCCAAGACAT GCGCGCCGGC GAAGTGATCT CCGCCGAAGT CGTGCGTGTC
GACCACAACT TCGTGGTCGT CAATGCCGGC CTGAAGTCCG AGGCCTACAT TCCGATCGAG
GAATTCCTGA ACGATCAGGG CGAGGTTGAG GTTCAGGCGG GCGATTTCGT TTCCGTCGCG
ATCGACGCGC TGGAAAACGG CTACGGCGAC ACGATCCTGT CGCGCGACAA GGCGAAGCGT
CTGGCTTCGT GGCTGTCGCT GGAAAAGGCG CTCGACAACA ACGAACTCGT CACGGGCACG
ATCACCGGCA AGGTGAAGGG CGGCATGACG GTGATGGTCA ACGGCATCCG CGCGTTCCTG
CCGGGCTCGC TCGTCGACAC GCGTCCCGTC AAGGACACGA CCCCGTACGA AGGCAAGACG
CTCGAGTTCC GCGTGATCAA GCTCGACCGC AAGCGTAACA ACGTCGTGCT GTCGCGCCGC
GCGGTGATCG AAGCCACGCA AGGCGAAGAG CGCGCGAAGC TGCTCGAGAC GCTCAAGGAA
GGCGCGATCG TCAACGGCGT CGTCAAGAAC ATCACCGATT ACGGCGCGTT CGTGGACCTC
GGCGGCATCG ACGGCCTGCT GCACATCACC GACATCGCAT GGCGCCGCGT GCGTCACCCG
AGCGAAGTCC TGTCGGTCGG CCAGGAAGTC ACCGCGAAGA TCCTCAAGTT CGACCAAGAG
AAGAACCGCG TGTCGCTCGG CATCAAGCAA CTGGGCGACG ATCCGTGGGA AGGCATCTCG
CGCCGTTACC CGTCGGGCAC GCGCCTGTTC GGCAAGGTCA CGAACATCAC CGACTACGGC
GCGTTCGTCG AAGTGGAATC GGGCATCGAA GGCCTCGTCC ACGTGTCGGA AATGGACTGG
ACGAACAAGA ACGTCGCTCC GTCGAAGGTT GTCCAGCTCG GCGACGAAGT CGAAGTCATG
GTGCTCGAGA TCGACGAAGA TCGTCGTCGT ATCAGCCTCG GCATGAAGCA GTGCAAGCCG
AATCCGTGGG ACGACTTCAG CCGCAACTTC AAGAAGGGCG ACAAGATCAC GGGCGCGATC
AAGTCGATCA CCGATTTCGG CGTGTTCATC GGCCTGCCGG GCGGCATCGA CGGCCTCGTC
CACCTGTCGG ACCTGTCGTG GAGCGAAGCC GGCGAAGAGG CTGTCCGCAA GTACAAGAAG
GGCGATGAAG TCGAGGCGAT CGTGCTCGGC ATCGACGTCG AGAAGGAACG CATTTCGCTC
GGCATCAAGC AGCTCGAAGG CGATCCGTTC AGCAACTACG TCGCGATGAA CGACAAGGGT
TCGATCGTCG ACGGCGTCGT GAAGTCGGTC GATGCGAAGG GCGCGGTCAT CACGCTGACG
CCGGACGTCG AGGGCTACCT GCGTGCGTCG GAAATCTCGC AGGATCGCGT CGAAGACGCT
CGCAACGTGC TGAAGGAAGG CGAGAAGGTC AACGCGATGG TGATCAACAT CGATCGCAAG
TCGCGCGGCA TCAACCTGTC GATCAAGGCG AAGGATTCGG CCGAGCAGCA GGAAGCGATG
CGCGGCCTGC AAGCCGATTC GAGCGCCGCT GCGACCGGTA CGACCAACCT CGGCGCGCTG
CTGAAGGCGA AGCTCGACGG CCAGAACCAG TAA
 
Protein sequence
MSDLQTSNPN TESFAALFEE SLTRQDMRAG EVISAEVVRV DHNFVVVNAG LKSEAYIPIE 
EFLNDQGEVE VQAGDFVSVA IDALENGYGD TILSRDKAKR LASWLSLEKA LDNNELVTGT
ITGKVKGGMT VMVNGIRAFL PGSLVDTRPV KDTTPYEGKT LEFRVIKLDR KRNNVVLSRR
AVIEATQGEE RAKLLETLKE GAIVNGVVKN ITDYGAFVDL GGIDGLLHIT DIAWRRVRHP
SEVLSVGQEV TAKILKFDQE KNRVSLGIKQ LGDDPWEGIS RRYPSGTRLF GKVTNITDYG
AFVEVESGIE GLVHVSEMDW TNKNVAPSKV VQLGDEVEVM VLEIDEDRRR ISLGMKQCKP
NPWDDFSRNF KKGDKITGAI KSITDFGVFI GLPGGIDGLV HLSDLSWSEA GEEAVRKYKK
GDEVEAIVLG IDVEKERISL GIKQLEGDPF SNYVAMNDKG SIVDGVVKSV DAKGAVITLT
PDVEGYLRAS EISQDRVEDA RNVLKEGEKV NAMVINIDRK SRGINLSIKA KDSAEQQEAM
RGLQADSSAA ATGTTNLGAL LKAKLDGQNQ