| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2915 |
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| Symbol | sohB |
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| ID | 3689981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3222080 |
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| End bp | 3223081 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637729371 |
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| Product | peptidase |
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| Protein accession | YP_334296 |
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| Protein GI | 76810646 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0641289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC AAATCAATCC GCCCGATTCG TCTTCGTCCC CCGCTGCGAA CGCCGCCCCC
CGAGAACCGA GTTGGGAGCG CGCCGTGCTC GAGCGCGTCG CGCTCGCGGC GATCAAGGAG
CAGCGCGCCG CGCGGCGCTG GAGGATCTTC TTTCGCTTCG CGTTCCTCGC CGTGCTCGGC
GCGCTCGCGT TCGCGTTCCT CAGCGTGTCC GGCGACGGCG GCAAGCTCGC GAGCGGCCGC
CACACGGCGG TCGTGACGAT CGACGGCGAG ATCGCCGCGA GCACCAACGC GAACGCCGAG
GACATCAACA CGGCGCTCGA CAGCGCGTTC GAGGATTCGG GCACGGTCGG CGTCGTGCTG
AAGATCAACA GCCCGGGCGG CAGCCCGGTG CAGGCGGGCA TCGTCTACGA CGAGATCCGG
CGGCTGCGCA AGAAGTATCC GGCGAAGCCG CTTTACGTCG TCGTCTCCGA CATGTGCGCG
TCGGGCGGCT ACTACATCGC GGCGGCGGCG GACAAGATCT ACGTCGACAA GGCGAGCATC
GTCGGCTCGA TCGGCGTGCT GATGGACGGG TTCGGCTTCA CCGGCCTGAT GGGCAAGCTG
GGCGTCGAGC GGCGCCTGCA TACGTCGGGC GAGAACAAGG GCTTCTTCGA TCCGTTCTCG
CCGGAGACGC CGAAGATGGA TGCGCACGCG CAGGAAATGC TCGACGAGAT CCACGCGCAG
TTCATCAAGG CGGTGAAGGA CGGCCGCGGC GCGCGCCTGC ACGAATCGCC GGACATTTTC
TCCGGGCTTT TCTGGACGGG CGCGAAGAGC ATCGAGCTCG GCCTCGCCGA CGATTACGGG
ACGACCGATA CTGTCGCGCG CGACGTGCTG AAGGCGCCCG ACCTCGTCGA CTACACGGTC
AAGGAAAGCC TGACCGATCG CGTCGCGCGC CGCTTCGGCG CGGCGCTCGG CAAGGCCGCG
CTGAAGGCGG CCGTCGCCGG CGGCGAGCTG AAGCTGCGCT GA
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| Protein sequence | MSDQINPPDS SSSPAANAAP REPSWERAVL ERVALAAIKE QRAARRWRIF FRFAFLAVLG
ALAFAFLSVS GDGGKLASGR HTAVVTIDGE IAASTNANAE DINTALDSAF EDSGTVGVVL
KINSPGGSPV QAGIVYDEIR RLRKKYPAKP LYVVVSDMCA SGGYYIAAAA DKIYVDKASI
VGSIGVLMDG FGFTGLMGKL GVERRLHTSG ENKGFFDPFS PETPKMDAHA QEMLDEIHAQ
FIKAVKDGRG ARLHESPDIF SGLFWTGAKS IELGLADDYG TTDTVARDVL KAPDLVDYTV
KESLTDRVAR RFGAALGKAA LKAAVAGGEL KLR
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