| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2743 |
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| Symbol | lpdA |
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| ID | 3689561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3036753 |
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| End bp | 3038522 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637729199 |
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| Product | pyruvate dehydrogenase, E3 component, dihydrolipoamide dehydrogenase |
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| Protein accession | YP_334129 |
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| Protein GI | 76808978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC
GAGGTCAACG TGAAGCCGGG CGACGTGATC GAAAAAGAGC AGACGCTCAT CACGCTCGAA
TCCGATAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACCGTGAA GGAAATCAAG
ATCAAGGCCG GCGACAAAGT CTCGCAAGGC ACCGTCATCG CCATCGTCGA AGCATCGGCA
GGCGCCGCCG CACCCGCACC CGCGAAAGCC CCCGAAGCAC CGAAGCCCGC AGCAGCTGCA
CCGGCTCCGG CCGCCGCCCC GGCACCCGCG CCGCAAGCCG GCAGCTACAG CGGCTCCGCC
GACATCGAGT GCGACATGCT CGTGCTCGGC GCCGGCCCCG GCGGCTACTC GGCAGCGTTC
CGCGCCGCCG ACCTCGGCAT GAAGACGGTG CTGGTCGAAC GCTACTCGAC GCTCGGCGGC
GTGTGCCTGA ACGTCGGCTG CATTCCGTCA AAGGCATTGC TGCACACGGC GCTCGTCGTC
GAGGAAGCGC AGGCGCTCGC GTCGCACGGC ATCACGTTCG GCAAGCCGCA GGTCGAGCTC
GACAAGCTGC GCGATTTCAA GGGCGGCGTC GTCAAGAAGC TGACGACGGG CCTCGCCGGC
ATGGCGAAGG CGCGCAAGGT CGAAGTGGTC ACGGGCGTCG GCGCGTTCGT CGATCCGTAT
CACATGGAAG TGCAGGGCGA AAACGGCAAG AAGATCGTCA AGTTCAAGCA GGCGATCATC
GCCGCCGGCT CGCAGGCGGT GAAGCTGCCG TTCATGCCGG AAGACCCGCG CGTCGTCGAT
TCGACGGGCG CGCTCGAACT GCGTCAGTTG CCCAAGCGCA TGCTCGTGAT CGGCGGCGGC
ATCATCGGCC TCGAAATGGC GACGGTGTAC TCCACGCTCG GCGCCGAGAT CGACGTCGTC
GAAATGATGG ACGGCCTGAT GATGGGCGCG GACCGCGATC TCGTGAAGGT CTGGGAAAAG
TACAACGCGA AGCGCTTCGG CAACGTGATG CTCAAGACCA AGACGGTCGG CGCGCAAGCG
AAGGAAGACG GCATCTACGT GACGTTCGAG GGCGAGAAGG CGCCGGCGCA AGCGCAGCGC
TACGACCTCG TGCTCGTCGC GGTGGGCCGC AGCCCGAACG GCAAGAAGAT CGGCGCCGAC
AAGGCGGGCG TGGCGGTCAC CGACCGCGGC TTCATCGACG TCGACAAGCA GATGCGCACG
AACGTGCCGC ACATCTTCGC GATCGGCGAC ATCGTCGGCC AGCCGATGCT CGCGCACAAG
GCCGTGCATG AAGGCCACGT CGCGGCCGAA GCCGCGCACG GCGAGAAGGC GTACTTCGAC
GCGCTGCAGA TCCCGTCGGT GGCGTACACC GATCCGGAAG TGGCATGGGC CGGCAAGACG
GAAGACCAGT GCAAGGCCGA AGGCATCAAG TACGGCAAGG CGGTGTTCCC GTGGGCCGCA
TCGGGCCGCG CGATCGCGAA CGGCCGCGAC GAGGGCTTCA CGAAGCTGCT CTTCGACGAG
GAAACCCACC GCGTGATCGG CGGCGGCATC GTCGGCCTGA ACGCGGGCGA CCTGATCAGC
GAAGTGTGCC TCGCGGTCGA GATGGGCGCG GACGCGGAAG ACATCGGCAA GACGATCCAT
CCGCACCCGA CGCTCGGCGA ATCGATCGGC ATGGCCGCCG AGCTGTACGA AGGCGTTTGC
ACGGATCTGC CGCCGCAGCG CAAGAAGTAA
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| Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEIK
IKAGDKVSQG TVIAIVEASA GAAAPAPAKA PEAPKPAAAA PAPAAAPAPA PQAGSYSGSA
DIECDMLVLG AGPGGYSAAF RAADLGMKTV LVERYSTLGG VCLNVGCIPS KALLHTALVV
EEAQALASHG ITFGKPQVEL DKLRDFKGGV VKKLTTGLAG MAKARKVEVV TGVGAFVDPY
HMEVQGENGK KIVKFKQAII AAGSQAVKLP FMPEDPRVVD STGALELRQL PKRMLVIGGG
IIGLEMATVY STLGAEIDVV EMMDGLMMGA DRDLVKVWEK YNAKRFGNVM LKTKTVGAQA
KEDGIYVTFE GEKAPAQAQR YDLVLVAVGR SPNGKKIGAD KAGVAVTDRG FIDVDKQMRT
NVPHIFAIGD IVGQPMLAHK AVHEGHVAAE AAHGEKAYFD ALQIPSVAYT DPEVAWAGKT
EDQCKAEGIK YGKAVFPWAA SGRAIANGRD EGFTKLLFDE ETHRVIGGGI VGLNAGDLIS
EVCLAVEMGA DAEDIGKTIH PHPTLGESIG MAAELYEGVC TDLPPQRKK
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