| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2685 |
|---|
| Symbol | lpxH |
|---|
| ID | 3690230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2979166 |
|---|
| End bp | 2979966 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637729141 |
|---|
| Product | UDP-2,3-diacylglucosamine hydrolase |
|---|
| Protein accession | YP_334071 |
|---|
| Protein GI | 76808750 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.159841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAGG AGACACCGCC ACGAAGCGTG TTTGCGGGCG TGCCCGGCGA GCGCGGGCTC
GCGCATGCGG CGCGCCCGTT CCTGTTCGTC TCCGATCTGC ACCTGAGCGA CGCGATCCCG
CATACGGTCG CCGCGTTCGA GCGCTTCGTA CGCGTGACGG CCGACAGCGC GGATTCGGTG
TTCATCCTCG GCGATCTGTT CGAATACTGG ATCGGCGACG ATATCCTCGA GCACGATCCG
TTCGCCGCGC GGATGGCCGC GCTGCTGCAC ACGTTCTCCG AGCGCGGCAT CGCGCTCTAC
GTAATGCACG GCAATCGCGA CTTCCTGCTC GGCAAGCGCT TCATGAAAGC GGCGGGCGCG
CTCCTCATTC CGGATCCGTC CGTCATCGTC GCGTTCGGCA ACCGCATCGT GCTCGCGCAT
GGCGACGCGC AATGCACGGC CGATCGCGGC TACCAATGGT TTCGCCGCTT CGCGCGCAAC
GGCGTCGCGC AGCGGCTCTT TCTCGCGTGG CCGTTCGCGT GGCGCCGCGC GCTCGCGCAG
CGGATGCGCG CGTCGAGCGA AACCGGCCGG ATACGCCCCG CTTCGCCGCG CTACGACGTG
ACGCGCAAAG GCGTTGCCGC GCTCTTGCGG CGCAGCGGCG CGCGCACGAT CATCCACGGC
CACACGCACA AGCCGGCGCG GCATGTCGAG GCAGACGGCG TGCGCTGGGT ATTGCCCGAT
TGGGAGCTCG ACCACGGCCT GCGACGCGGC GGTTATCTGC GCGTCGACGC GGAAGGAATA
CGCGCGCTGC CGCTCGATTG A
|
|---|
| Protein sequence | MLQETPPRSV FAGVPGERGL AHAARPFLFV SDLHLSDAIP HTVAAFERFV RVTADSADSV
FILGDLFEYW IGDDILEHDP FAARMAALLH TFSERGIALY VMHGNRDFLL GKRFMKAAGA
LLIPDPSVIV AFGNRIVLAH GDAQCTADRG YQWFRRFARN GVAQRLFLAW PFAWRRALAQ
RMRASSETGR IRPASPRYDV TRKGVAALLR RSGARTIIHG HTHKPARHVE ADGVRWVLPD
WELDHGLRRG GYLRVDAEGI RALPLD
|
|---|
| |