Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2521 |
Symbol | mscL |
ID | 3690939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2792711 |
End bp | 2793310 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637728977 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_333913 |
Protein GI | 76810901 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.334793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGAAAT GGGCCGGAAA CGGCCCATTT TTCTGCGCGC GCCTTTGTCA AGCTTTTTCA GATGAACTAT CGATAAAGGA TCGGGTTCGT TATGATGATG GCCATCAACG TGCCGTAACG AATCGTTGCG CTGCGCCTCA TTTCATTTTC GACAGGAGCA AGCCGCCCAT GAGCATCATC AAGGAATTCA AGGAATTCGC CGTCAAGGGC AACGTCATGG ACCTCGCCAT CGGCGTGATC ATCGGCGGAG CGTTTTCGAA GATCGTCGAC TCGGTGGTGA AGGATCTCAT CATGCCCGTG ATCGGCGTGC TGACGGGCGG CCTGGATTTC TCGAACAAAT TCGTGCTGCT CGGTCAGATT CCGGCTTCGT TCAAGGGCAA TCCGGAATCG TTCAAGGATC TGCAGGCAGC GGGCGTCGCG ACGTTCGGCT ACGGCTCGTT CATCACCGTG CTGATCAATT TCATCATCCT CGCGTTCATC ATCTTCCTGA TGGTCAAGTT CATCAACAAG CTGCGCAAGC CCGAGGAGGC CGCGCCCGCC GCGACGCCCG AGGACGTGCT GCTGCTGCGC GAGATCCGCG ATTCGCTCAA GCAGCGCTGA
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Protein sequence | MTKWAGNGPF FCARLCQAFS DELSIKDRVR YDDGHQRAVT NRCAAPHFIF DRSKPPMSII KEFKEFAVKG NVMDLAIGVI IGGAFSKIVD SVVKDLIMPV IGVLTGGLDF SNKFVLLGQI PASFKGNPES FKDLQAAGVA TFGYGSFITV LINFIILAFI IFLMVKFINK LRKPEEAAPA ATPEDVLLLR EIRDSLKQR
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