Gene BURPS1710b_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2521 
SymbolmscL 
ID3690939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2792711 
End bp2793310 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content57% 
IMG OID637728977 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_333913 
Protein GI76810901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.334793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGAAAT GGGCCGGAAA CGGCCCATTT TTCTGCGCGC GCCTTTGTCA AGCTTTTTCA 
GATGAACTAT CGATAAAGGA TCGGGTTCGT TATGATGATG GCCATCAACG TGCCGTAACG
AATCGTTGCG CTGCGCCTCA TTTCATTTTC GACAGGAGCA AGCCGCCCAT GAGCATCATC
AAGGAATTCA AGGAATTCGC CGTCAAGGGC AACGTCATGG ACCTCGCCAT CGGCGTGATC
ATCGGCGGAG CGTTTTCGAA GATCGTCGAC TCGGTGGTGA AGGATCTCAT CATGCCCGTG
ATCGGCGTGC TGACGGGCGG CCTGGATTTC TCGAACAAAT TCGTGCTGCT CGGTCAGATT
CCGGCTTCGT TCAAGGGCAA TCCGGAATCG TTCAAGGATC TGCAGGCAGC GGGCGTCGCG
ACGTTCGGCT ACGGCTCGTT CATCACCGTG CTGATCAATT TCATCATCCT CGCGTTCATC
ATCTTCCTGA TGGTCAAGTT CATCAACAAG CTGCGCAAGC CCGAGGAGGC CGCGCCCGCC
GCGACGCCCG AGGACGTGCT GCTGCTGCGC GAGATCCGCG ATTCGCTCAA GCAGCGCTGA
 
Protein sequence
MTKWAGNGPF FCARLCQAFS DELSIKDRVR YDDGHQRAVT NRCAAPHFIF DRSKPPMSII 
KEFKEFAVKG NVMDLAIGVI IGGAFSKIVD SVVKDLIMPV IGVLTGGLDF SNKFVLLGQI
PASFKGNPES FKDLQAAGVA TFGYGSFITV LINFIILAFI IFLMVKFINK LRKPEEAAPA
ATPEDVLLLR EIRDSLKQR