Gene BURPS1710b_2427 details

Gene Information

• Locus tag: BURPS1710b_2427
• ID: 3691555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 2698051
• End bp: 2698521
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637728883
• Product: LysM domain/BON superfamily protein
• Protein accession: YP_333822
• Protein GI: 76809403
• COG category: [S] Function unknown
• COG ID: [COG1652] Uncharacterized protein containing LysM domain

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCTTC TTTCGTTCAT CAAGGAAGCG GGTGAAAAGC TGCTCGGCAA GAGCGACGAG 
CAAGCCGCGA CCGATCCGGC CGCCGCGAAC CAGACGGCCG CCGATGCGAT CAAGAACTAC 
ATCTCCGCAC AGGGCCTCGA CACGTCGAAC CTGACGGTCG CGTTCGACGG CGCGTCGCGC 
ACCGTCACGC TCACGGGCAG CGTCGCGGAT CTCGACACGA AGGCCAAGGT CAAAGTGGCG 
GCGGGCAACG TGCAGGGCGT CGCGGGCGTC AACGACGACG ACCTGCAGCC TGACGATCCG 
CAAGTGCAGT ACCACGACGT CGTCTCCGGC GACAACCTGT GGAAGATCGC CGAGAAGTAC 
TACGGCGACG GCTCGAAGAA CGACGCGATC TTCCAGGCGA ACCGCCCGAT GCTGTCGAGC 
CCGGACCGGA TCTACCCCGG CCAGAAGCTC GTGATTCCGC CGCAGTCCTG A 

 

Protein sequence

MGLLSFIKEA GEKLLGKSDE QAATDPAAAN QTAADAIKNY ISAQGLDTSN LTVAFDGASR 
TVTLTGSVAD LDTKAKVKVA AGNVQGVAGV NDDDLQPDDP QVQYHDVVSG DNLWKIAEKY 
YGDGSKNDAI FQANRPMLSS PDRIYPGQKL VIPPQS