| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2207 |
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| Symbol | gabD |
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| ID | 3690872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2464674 |
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| End bp | 2466116 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637728663 |
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| Product | succinate-semialdehyde dehydrogenase (NADP+) |
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| Protein accession | YP_333602 |
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| Protein GI | 76812101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.335018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGACC CCTCGCTGTT GAGGCATCAA GCGTATATCG GCGGTGAATG GCAAGCCGCG
GATTCTGACG CCACGTTCGA AGTCTTCGAC CCGGCAACGG GAGAATCCCT TGGTACCGTG
CCGAAAATGG GGGCGGCGGA AACGGCGCGT GCCATCGAGG CGGCTCAAGC CGCGTGGGCC
GGCTGGCGCA TGAAGACGGC GAAAGAGCGC GCGGCCATCC TGCGTCGCTG GTTCGACCTG
GTGATCGCGA ACAGCGACGA TCTCGCGCTG ATTCTCACCA CTGAGCAGGG CAAGCCGCTC
GCGGAAGCCA AGGGCGAGAT CGCTTACGCA GCCTCGTTCA TCGAATGGTT TGCCGAAGAA
GGCAAGCGCG TCGCCGGGGA TACGCTTCCC ACACCTGACG CGAACAAGCG GATCGTCGTC
GTCAAGGAGC CGATCGGTGT CTGCGCTGCC ATCACACCGT GGAATTTCCC CGCCGCCATG
ATTGCGCGGA AGGTAGGGCC GGCCCTCGCT GCCGGTTGTC CGATCGTCGT CAAGCCCGCC
GAGTCGACTC CGTTCTCCGC GCTTGCCATG GCGTTTTTGG CTGAACGTGC AGGCGTTCCG
AAAGGCGTGC TAAGTGTCGT CATCGGCGAC CCGAAAGCGA TCGGCACCGA GATAACGAGC
AATCCCATCG TCCGAAAGCT GTCGTTCACG GGATCCACGG CGGTCGGCCG ATTGTTGATG
GCTCAGAGCG CCCCGACGGT GAAGAAACTC ACGCTCGAGT TGGGCGGAAA TGCTCCATTC
ATTGTCTTCG ACGATGCCGA TCTCGATGCA GCCGTCGAAG GCGCCATCGC ATCGAAATAC
CGCAACAACG GGCAAACGTG CGTCTGTACC AACCGCTTTT TCGTACACGA GCGTGTCTAC
GATGCGTTCG CGGACAAGCT CGCGGCGGCC GTGAGCAAGC TCAAGGTCGG ACGCGGAACC
GAGAGCGGAG CGACGCTCGG GCCGCTGATC AACGAGGCGG CGGTGAAGAA GGTGGAATCG
CACATTGCCG ATGCGCTTGC TAAAGGCGCC TCGCTCATGA CGGGCGGCAA GCGGCACGCA
TTGGGGCACG GTTTTTTCGA ACCGACGGTA TTGACCGGCG TGAAGCCGGA TATGGATGTG
GCGAAAGAGG AGACGTTCGG CCCGCTCGCA CCGTTGTTCC GGTTTGCGTC GGAGGAAGAA
TTGGTGCGCC TTGCCAACGA TACGGAGTTC GGCCTTGCCG CTTATTTATA CAGCCGCGAT
ATCGGTCGAG TTTGGCGCGT TGCCGAGGCC CTCGAATACG GCATGGTCGG GATCAATACG
GGGCTCATTT CAAACGAAGT CGCGCCGTTC GGCGGTGTCA AGCAATCTGG GCTAGGCCGA
GAAGGATCGC ATTACGGTAT CGACGACTAT GTCGTGATCA AGTATTTGTG CGTCGCTGTT
TGA
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| Protein sequence | MKDPSLLRHQ AYIGGEWQAA DSDATFEVFD PATGESLGTV PKMGAAETAR AIEAAQAAWA
GWRMKTAKER AAILRRWFDL VIANSDDLAL ILTTEQGKPL AEAKGEIAYA ASFIEWFAEE
GKRVAGDTLP TPDANKRIVV VKEPIGVCAA ITPWNFPAAM IARKVGPALA AGCPIVVKPA
ESTPFSALAM AFLAERAGVP KGVLSVVIGD PKAIGTEITS NPIVRKLSFT GSTAVGRLLM
AQSAPTVKKL TLELGGNAPF IVFDDADLDA AVEGAIASKY RNNGQTCVCT NRFFVHERVY
DAFADKLAAA VSKLKVGRGT ESGATLGPLI NEAAVKKVES HIADALAKGA SLMTGGKRHA
LGHGFFEPTV LTGVKPDMDV AKEETFGPLA PLFRFASEEE LVRLANDTEF GLAAYLYSRD
IGRVWRVAEA LEYGMVGINT GLISNEVAPF GGVKQSGLGR EGSHYGIDDY VVIKYLCVAV
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