Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2059 |
Symbol | |
ID | 3690557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2226877 |
End bp | 2228418 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637728515 |
Product | Outer membrane efflux protein |
Protein accession | YP_333454 |
Protein GI | 76809427 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.26387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAC CCCGGGCCCG GCGGCGCGGC GCGCGCGCAG CGCGGCGGCC GAACGGGCCG CGGGCCTGGC CGCTCGCGGT CGCGGCCGCG CTCGTCGCGG GCTGCACGCT CGCGCCGCGC TACGAGCGGC CGGCCGCGCC CGTGCCGGCG CATTATTGGT CGACGGCGAC GGGCGCGCCG CGCGAGGCGG GCCCGGCGGC CGCCGGCGGC CCGCGCGCGA TGCCGGACGC GCGCCGCGGC GACGCCGGGC GCGACGCCCG CGACGCGCGG CTCGACGACT GGCGCGCGTA TTTCACCGAT CCGGCGCTGC GCGCGCTGAT CGACGCGGCG CTCGCGAACA ATCGCGACCT GCGGATCGCG ACGCTGCGTA TCCAGGAAGC GCGCGGCCTC TACGGCGTCG CGCGCGCGGA CCGGCTGCCG TCGATCGACG GCAGCCTCGG CTACGAGCGC ACGCGGCTTT ACGACCCGGT GCTGCGCGAG AGCGCGACGA GCTCGCTGTA TCGCGCGAGT GTCGGCGTGA GCGCGTTCGA GATCGATCTG TTCGGCCGCG TGAAGAGCCT CTCGGACGCG GCGCTCGCCG AGTACTTCGC GACCGCCGAA GCGCAGCGCG CGGCGCGCAT CAGCCTGATC GCCGAAGTCG CGTCCGCGTA CGTGACCGAG CGCGCGCTCG TCGATCAACT GGGGCTCGCC GAACGCACGC TCGCCGCGCG CGACGCGGCC TACGCGCTCA CGCAGCGCCG TTACGCGGCC GGCACGAGCA CGGCGATCGA GCTGCGCACG GCCGAGATGC TCGTCGCGTC GGCGCGCGCG TCGAAGGCGG CGCTCGAGCG CGAGCACACG CAGGCGGCGA GCGCGCTGAA GCTGCTCGCG GGCGACTTCA TGACGGCGCT GCCCGCCGAT GCGCCCGCGC TCGACGCGCT CGCGGTGGCG CGGGTGTCGC CGGGGCTGTC GTCGGATCTG CTCGAGCAGC GCCCGGACAT CCGGCAGGCC GAGCAGCGCC TCGTCGCGGC GAACGCGAAC ATCGGCGCGG CGCGCGCGGC GTTCTTCCCG CGCATCGCGC TCACGACCGA CGTCGGCTCG GTGAGCGACG CGTTCTCGGG ACTCTTCTCG GCCGGCTCGA GCGTGTGGAC GTTCGCGCCG CGGCTCACGC TGCCGATTTT CGCGGGCGGG CGCAATCGTG CGAATCTCGA CGTGGCGGAC GCGCGCAAGC ATATCGCGGT CGCCGAATAC GAGAAGACGA TCCAGACGGC GTTTCGCGAA GTCGCCGATG CGCTCGCGGC GCGCGATCAG ATCGACGCGC AGCTTGCCGC GCAGCAGGCG GTCTACGGTG CGGACGCGGA GCGGCTGCGG CTTGCGCAGC GGCGCTACGA CAGCGGCGTG GCGAGCTATC TCGAGCTGCT CGACGCGCAG CGCAGCACGT TCGAGTCCGG GCAGGAGCTG ATTCGCCTGA AGCAACTGCG GCTCACGAAC GCGATCACGC TGTATCGCGC GCTGGGCGGG GGCTGGTCGC GCGCCGGGTG CGGCGGCGAT GGGTGTGCTT GA
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Protein sequence | MMKPRARRRG ARAARRPNGP RAWPLAVAAA LVAGCTLAPR YERPAAPVPA HYWSTATGAP REAGPAAAGG PRAMPDARRG DAGRDARDAR LDDWRAYFTD PALRALIDAA LANNRDLRIA TLRIQEARGL YGVARADRLP SIDGSLGYER TRLYDPVLRE SATSSLYRAS VGVSAFEIDL FGRVKSLSDA ALAEYFATAE AQRAARISLI AEVASAYVTE RALVDQLGLA ERTLAARDAA YALTQRRYAA GTSTAIELRT AEMLVASARA SKAALEREHT QAASALKLLA GDFMTALPAD APALDALAVA RVSPGLSSDL LEQRPDIRQA EQRLVAANAN IGAARAAFFP RIALTTDVGS VSDAFSGLFS AGSSVWTFAP RLTLPIFAGG RNRANLDVAD ARKHIAVAEY EKTIQTAFRE VADALAARDQ IDAQLAAQQA VYGADAERLR LAQRRYDSGV ASYLELLDAQ RSTFESGQEL IRLKQLRLTN AITLYRALGG GWSRAGCGGD GCA
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