| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1931 |
|---|
| Symbol | |
|---|
| ID | 3689450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2107157 |
|---|
| End bp | 2108836 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637728387 |
|---|
| Product | putative exported heme utilisation related protein |
|---|
| Protein accession | YP_333330 |
|---|
| Protein GI | 76809825 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2831] Hemolysin activation/secretion protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.560959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCA GACACGATGC TTGGATGCTG CTGCTCGCGC TCGTCGCGGC CGCCGGCGCC
GCGCACGCGC AAAGCCGCTC GGGCGGCAAT CCGCTGGAAG CCCTCCCGCA GATCAACACG
CCGCAAAAGC CGAGCGTCAC CGTGCAGGTC GCGCCGCAGG AAGTCCAGGT GCAGGCGCTG
CTCGCGCGCC ATCTGACGCC GAGCTCGTTC CAGGTCGAAG GCGTCAAGTC GATTCCGTTC
GAAGAGATCT CGCAACGCTT CACGCCGCTC GTCGGCAAGG ACATCACGAT CGGCCAGTTG
ATCGAGACGG CGAACGGCGT GACCAAGCTG TACCAGGAGC GCGGCTACGC GCTGTCGTTC
GCGTTCGTTC CCGCGCAGAC GTTCGAAGGC GGCGTCGTGC GCGTGACGGT CGTCGAAGGC
TATGTCGCGA ACCTGAAGAT CACGGGCCGC CCCGGCGCGA TGGAGCCGAA GGTACGCGCG
ATCGCCGCGC ACATCATGGC CGACCGCCCG CTGCGCCGCG CGACGTTCGA GCGCTACGTC
AACACGTTCG GCCTGCTGCC CGGCGTGACG GTGAAGGCGA ACGTGCCGCC GCCGCAGAAT
ACCGACGGCG CGACGACGCT CGAGCTCAAC GTCGATCGCA AGCCGTTCAA CGTGAGCGCG
GGCCTGAACA CGAACAATCC GGGCCTGCAG GGCCTGTTCA CGGTGACGGA GAACGGACTC
ACGTCGCTCG GCGAGCAGAT GAGCATCTCC GCGCTGTTCC CGAAAGGGCC GAACAATCAG
ACGTACGTGT CGTTCAACGG CGCCGTGCCG ATCGGCAGCA ACGGCCTCGT CACGCGTCTG
GACGCGAGCC ACTACCGCGG CAATCCGTCC GTCGATCAGA CCGTGCTGCC GAACGTGCAG
CGCACCGTGA TCAACGACAA GCTCGGCCTG TCGGCGTCGT ATCCGCTGAT GCTGAGCAAC
CAGCGCAGCC TGCTCGGCAC GGTGTCGGGC TATGCGTCGC ACAGCGAGGA TCGCTACCAG
AACCAGAGCA CGGGCGCGAC GATCGGCATG CGCTCGCAGG TGCGCGTGCT GCAGATGCAG
TTCGACTACA CGAGCGTGCA GCCGAAGCAG GTGCAGAAGC TGAGCTTCAA CGTCGCCAAG
GCGTTCGACA TCCTGGGCGC GTCGAAATCG GGCTTCACGA ACCTGCCGGG CGTCATCGCG
ACGAACCCCG CGTCGACGAC GTTCGTGCGC ACGGGCGCCA CGTTCGTGCA GACGAACGAG
TGGCCGTTCA AGATCGGCTC GACCGTGCAG CTCACCGGCC AGTACAGCCC CGATTCGCTG
CCGAGCACCG AGCAGATCTC GTTCGGCGCG CAGCGTTTCG CGCTCGGCTA TCAGCCGGGC
GAGACGTCGG GCGATTCGGG CTGGGGCGCG TCGCTCGAGC TCAATCGCGC GTTCGCGCCG
GGCTTCACGT ACCTGAAGAA CATCACGCCG TACATCGTGT ACGACATGGC GCGCGTCTAT
CTGCATTCGG GCACGCCGGT GCCGCGCCGC CTGTCGTCGG CCGGGTTCGG CGTGCGGCTG
ACCGACAGCC GCTTCTACAA TCTCGACGTG TCGATCGCGA AGCCCGTCGG CGACGCGCCG
ATCGAAAGCG CATCGCGCAG CCCGCGCGTG AACGCCTCGT TCTCGTATCA ACTCTATTGA
|
|---|
| Protein sequence | MKSRHDAWML LLALVAAAGA AHAQSRSGGN PLEALPQINT PQKPSVTVQV APQEVQVQAL
LARHLTPSSF QVEGVKSIPF EEISQRFTPL VGKDITIGQL IETANGVTKL YQERGYALSF
AFVPAQTFEG GVVRVTVVEG YVANLKITGR PGAMEPKVRA IAAHIMADRP LRRATFERYV
NTFGLLPGVT VKANVPPPQN TDGATTLELN VDRKPFNVSA GLNTNNPGLQ GLFTVTENGL
TSLGEQMSIS ALFPKGPNNQ TYVSFNGAVP IGSNGLVTRL DASHYRGNPS VDQTVLPNVQ
RTVINDKLGL SASYPLMLSN QRSLLGTVSG YASHSEDRYQ NQSTGATIGM RSQVRVLQMQ
FDYTSVQPKQ VQKLSFNVAK AFDILGASKS GFTNLPGVIA TNPASTTFVR TGATFVQTNE
WPFKIGSTVQ LTGQYSPDSL PSTEQISFGA QRFALGYQPG ETSGDSGWGA SLELNRAFAP
GFTYLKNITP YIVYDMARVY LHSGTPVPRR LSSAGFGVRL TDSRFYNLDV SIAKPVGDAP
IESASRSPRV NASFSYQLY
|
|---|
| |