Gene BURPS1710b_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1926 
SymbollpdA 
ID3691504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2102975 
End bp2104405 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID637728382 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_333325 
Protein GI76809352 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGG AATTTGACGT CGTCGTGATC GGCGCGGGCC CGGGCGGCTA TATCGCCGCG 
ATCCGCGCCG CTCAACTGGG CAAAACGGTT GCCTGCATCG AAAAATGGAA GAACCCGGCC
GGCGCGCTGA AGCTGGGCGG CACGTGCCTG AACGTCGGGT GCATCCCGTC GAAGGCGCTG
CTCGCGTCGT CGGAGGAGTT CGAGAACGCG CAGCATCATC TGGCCGACCA CGGCATCAGC
GTCGACGGCG TGAAGATGGA CGTCGCGAAG ATGCTCGCGC GCAAGGACGG GATCGTCGAG
AAGATGACGG GCGGGATCGA GTTCCTGTTC AAGAAGAACA AGATCACGTG GCTCAAGGGC
CACGGCAAGT TCACCGGCAA GAGCGACGCC GGCGTGCAGA TCGAAGTGAG CGGCGAAGGC
GAGACGCAAG TCGTCACCGC GAAGAACGTG ATCATCGCGA CGGGCTCGAA GGCGCGCCAC
CTGCCGAACG TGCCGGTCGA CAACAAGATC GTCGCGGACA ACGAAGGCGC GCTGGCGTTC
GACTCGGTGC CGAAGAAGCT CGCGGTGATC GGCGCGGGCG TGATCGGCCT CGAGCTCGGC
TCGGTGTGGC GGCGCCTCGG CGCCGAAGTG ACGGTGCTCG AAGCGCTGCC GGCGTTCCTC
GGCGCGGCCG ACGAAGCGCT CGCGAAGGAA GCGGCGAAGC TGTTCAAGAA GCAGGGCCTC
GACATCCATC TCGGCGTGAA GATCGACGAG GTGAAGACGG GCGCGAACGG CGTGTCGATC
GCTTACACCG ACAAGGACGG CAACGCGAAG ACGCTCGACG CCGACCGTCT GATCGTGTCG
GTCGGCCGCG TGCCGAACAC CGACAACCTC GGCCTCGAGG CGATCGGCCT GAAGGCGAAC
GAGCGCGGCT TCATCGACGT CGACGACCAC TGCCGCACCG CGGTGCCGAA CGTGTACGCG
ATCGGCGACG TGGTGCGCGG CCCGATGCTC GCGCACAAGG CGGAGGACGA AGGCGTGCTG
GTCGCGGAAG TGATCGACGG CCAGAAGCCG CATATCGACT ACAACTGCAT TCCGTGGGTG
ATCTACACGT ACCCGGAAAT CGCGTGGGTC GGCAAGACGG AGCAGCAGTT GAAGGCCGAG
GGCCGCGAGA TCAAGTCGGG CAAGTTCCCG TTCTCGATCA ACGGCCGCGC GCTCGGCATG
AACGCGCCGG ACGGCTTCGT GAAGATGATC GCGGATGCGA AGACCGACGA GCTGCTCGGC
GTGCACGTGA TCGGCGCGAA CGCGTCGGAC CTGATCGCCG AAGCCGTCGT CGCGATGGAG
TTCAAGGCGG CGTCGGAAGA CATCGCCCGC ATCTGCCATC CGCACCCGTC GATGTCCGAA
GTGATGCGCG AAGCGGCGCT CGCCGTCGAC AAGCGCTCGC TGAACAGCTA A
 
Protein sequence
MSKEFDVVVI GAGPGGYIAA IRAAQLGKTV ACIEKWKNPA GALKLGGTCL NVGCIPSKAL 
LASSEEFENA QHHLADHGIS VDGVKMDVAK MLARKDGIVE KMTGGIEFLF KKNKITWLKG
HGKFTGKSDA GVQIEVSGEG ETQVVTAKNV IIATGSKARH LPNVPVDNKI VADNEGALAF
DSVPKKLAVI GAGVIGLELG SVWRRLGAEV TVLEALPAFL GAADEALAKE AAKLFKKQGL
DIHLGVKIDE VKTGANGVSI AYTDKDGNAK TLDADRLIVS VGRVPNTDNL GLEAIGLKAN
ERGFIDVDDH CRTAVPNVYA IGDVVRGPML AHKAEDEGVL VAEVIDGQKP HIDYNCIPWV
IYTYPEIAWV GKTEQQLKAE GREIKSGKFP FSINGRALGM NAPDGFVKMI ADAKTDELLG
VHVIGANASD LIAEAVVAME FKAASEDIAR ICHPHPSMSE VMREAALAVD KRSLNS