| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1921 |
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| Symbol | |
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| ID | 3691408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2094048 |
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| End bp | 2095592 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637728377 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_333320 |
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| Protein GI | 76809752 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.330678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCATTA TCCACTCCGA ATCAGATGCC GAGCCAGGAA ACCCACCGAT GAAAACCCTC
CCGTTGTCCG CTTGCCGGAC CGCCGTGGCC GTCGCGGTCG CCGCGCTCGC GCTCGCGGGA
TGCGCGAACT ATTTCGGCCT CAAGAGCGAC AAGGCGATCG CTCCCGCGGC GCAGTTCGAA
AGCGCGCGGA GCCTGCCCGC GCAGGGCGGC CAATGGCCGT CGCTCGACTG GGCGAACCAG
TTCGGCGATC CGCAATTGCC GAAGCTGATC GACGAGGCGC TCGAAGGCAA TCCGACGATC
GCGCAGGCGC AGGCGCGCAT CGCGAAGGCA TCGTCGTACA TCGAGTCGTC GCGCTCGACG
CTGCTGCCGA AGGCCGACGC GAAGTACTCG TGGACCCGCG AGCTGTACTC GGGCAACGCC
CTTTTCCCGC CCCCGTACGG CGGCCAGTGG TACAGCGAGA ACAACGCGCT CGCGAGCGCG
TCGTGGGAGC TCGATCTGTG GGGCAAGAAC CGCGCGCGCC TGAATGCGGC CGTGTCGCAG
GAAAAGGCCG CCGAAGCCGA CCTGCAGCAG GCGCGCGTGA CGCTCGCGAC GTCGGTCGCG
CGCACGTACA ACCAGCTCGC GCAACTGTAC GCGCTGCGCG ACATCGCCGG GCGCGAGATC
TCGAACCGGC AGACGGTCGG CAAGATCACC GACGGCCGCG TCGGCGCGGG CCTCGACACG
AACGTCGAGC GCCAGACCGC GCGCGGCAAC ATCGCGACGA GCCAGTCGAC GCTGTCCGAT
CTCGACGGCC AGATCACGAA CGTCCGCTAT CAGCTCGCCG CGCTGCTCGG CAAAGGTCCG
GACCGCGGGC TGCAGATCGC CGCGCCCGTG CTGAGCGCGG GCGGCGCGGT CGCGCTGCCG
GAGAACCTGC CCGCCGATCT CGTGTCGCGC CGCCCGGATC TCGTCGCCGC GCGCTGGCAG
GTCGAAGCGG CGATGCACGA CGTGAAGGAA GCGAAAGCCG AGTTCTTTCC GGACATCAAC
CTCGCGGCGG GCTTCGGCTT CGACGCGTTC GGCTGGGGCC GATTCCTGAA CTTCGCGAGC
CGCCAGGCGC AGTTCGGCCC CGCGATCCAC CTGCCGATCT TCGACGGCGG CGCGCTGCGC
GCGCAATTGA AGGGCCGCTA CGCGGACTTC GATCTGTCGG TCGCGAACTA CAACCAGACG
CTCATCAACG CGCTGAACGA CGTCGCGACG CAAGTCGCGT CGATTCGCTC GGTCGACACG
CAAATGGGCG ACGCGCAGCG CGCGCTCGAT GCGTCGACGC GCGCCTACGA GCTCGCGGTG
ATCCGCTACA AGGCGGGCCT GTCGCCGCAG TTGCAGGTGC TCAACGCGGA CAGCAACCGG
CTCGCCGCCG AGCAGACGGT GACGAACCTG AAGATGCGCC GCCGCGACCT GCAGATCGGC
CTCGTGAAGG CGCTCGGCGG CGGCTTCGAC GCGGCCGGCA CACGGCTCGC CGCGCCCGCT
CCCGCCTCGG CGCCGGCCGC GCCCGCGCAG CACGCATCGA ACTGA
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| Protein sequence | MSIIHSESDA EPGNPPMKTL PLSACRTAVA VAVAALALAG CANYFGLKSD KAIAPAAQFE
SARSLPAQGG QWPSLDWANQ FGDPQLPKLI DEALEGNPTI AQAQARIAKA SSYIESSRST
LLPKADAKYS WTRELYSGNA LFPPPYGGQW YSENNALASA SWELDLWGKN RARLNAAVSQ
EKAAEADLQQ ARVTLATSVA RTYNQLAQLY ALRDIAGREI SNRQTVGKIT DGRVGAGLDT
NVERQTARGN IATSQSTLSD LDGQITNVRY QLAALLGKGP DRGLQIAAPV LSAGGAVALP
ENLPADLVSR RPDLVAARWQ VEAAMHDVKE AKAEFFPDIN LAAGFGFDAF GWGRFLNFAS
RQAQFGPAIH LPIFDGGALR AQLKGRYADF DLSVANYNQT LINALNDVAT QVASIRSVDT
QMGDAQRALD ASTRAYELAV IRYKAGLSPQ LQVLNADSNR LAAEQTVTNL KMRRRDLQIG
LVKALGGGFD AAGTRLAAPA PASAPAAPAQ HASN
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