| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1905 |
|---|
| Symbol | nlpB |
|---|
| ID | 3689906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2074065 |
|---|
| End bp | 2075270 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637728361 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_333304 |
|---|
| Protein GI | 76811838 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3317] Uncharacterized lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATC TTCGTCTTAC CAAGCGGTTC GCAGCACTGC TTGCAACCGG CGCGTTCGTT
GCCGGCTGCA GTTCGCCGTC GCCTACGAAA ATCGACTACA AGAGCGACTC GAAATCGAAG
GAGGTGTCGC TCGCGGTGCC GCCCAACATG CTCGACGAGA CGCCGGATCA ACGTTCTCTG
CCGCCGCAGG GCGGCGCGAC GTCGCTTTCC AGCCTGCAGC AGGTGCAGCA GGCCGCGCCG
CCGACCGATT CGGTCGCGCC CGCCGTGCCG GGCATGCACA TTCAGCGCGA CGGCACCGAG
AGCTGGCTCG TGATCGACGA CAAGGCGCCC GCGCAAATCT GGCCTCAGGT GCGCCGCTTC
TGGCAGGAGC AGGGTTTCCT GCTTGTCGTC GAGCAGCGCG ACAAGGGCGT GATGGAAACC
GACTGGAACG AAACGCATCC GCAGATCAAC GACGGCCTGA TTCGCGGCGT GATCTCGAAG
GCGATGGGCA ACTCGTACGT GACGGCGGAG CGCAACAAGT ACCGCACGCG CCTCGACGCC
GCGCCGAACG GCGGCACCTA CGTGTTCATC AGCCAGAAGG GAATGCGCGA GGCGCTGACG
GGCGCGAACA ACGATTCGAG CAAGTGGGAG CCGAAACCGA ACGATCCCGG CCTCGAGACC
GAATACCTGA AGCGCCTGAT GGCCGTGATC GCGCAGAACG ACGCGCGCGT GAAGGCGGCA
GGCGTGCCGA TCACCGACGA TGCGGCGCCG TCGCGCGCGA AGGCGTCGAG CAACAAGAGC
AAGGAAGCGG CAGCGGCGAT CGCCGCGAAG AACGTCGCGA GCGCGTCGAC ATCGAGCACA
CCGAGCGGAG CGTCGGTGCC GGACGTGCCG CCTGAAGTGA CGCTCGCGGA ACCGTACGAT
CGTTCGTGGC TGCATGTCGG CCTGGCGCTC GATCGCGCGA ATTTCACGGT CGACGATCGC
GATCGCACGA AGGGGCTGTA CTACGTCCGC TACGTCGATC CGAAGGATCT GAGCGTCGAG
GAGCAGGGCT TCTGGAGCCA GCTCTTCCAC GGCAAGAAGG AGAAGAAGGC GAAGCAATAC
CTGGTCAACG TGAAGGCGGT GACCGAAGGC GAGACGCGCA TCGCGGTGGT CGACGACAAG
GGCAATGTCG ATGCGTCGGC GCCCGCGCGG CAGATCATGT CGCTCCTCGT CAATCAGTTG
CGCTGA
|
|---|
| Protein sequence | MTDLRLTKRF AALLATGAFV AGCSSPSPTK IDYKSDSKSK EVSLAVPPNM LDETPDQRSL
PPQGGATSLS SLQQVQQAAP PTDSVAPAVP GMHIQRDGTE SWLVIDDKAP AQIWPQVRRF
WQEQGFLLVV EQRDKGVMET DWNETHPQIN DGLIRGVISK AMGNSYVTAE RNKYRTRLDA
APNGGTYVFI SQKGMREALT GANNDSSKWE PKPNDPGLET EYLKRLMAVI AQNDARVKAA
GVPITDDAAP SRAKASSNKS KEAAAAIAAK NVASASTSST PSGASVPDVP PEVTLAEPYD
RSWLHVGLAL DRANFTVDDR DRTKGLYYVR YVDPKDLSVE EQGFWSQLFH GKKEKKAKQY
LVNVKAVTEG ETRIAVVDDK GNVDASAPAR QIMSLLVNQL R
|
|---|
| |