| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1717 |
|---|
| Symbol | |
|---|
| ID | 3691924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 1841754 |
|---|
| End bp | 1843331 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637728173 |
|---|
| Product | prohead protease |
|---|
| Protein accession | YP_333118 |
|---|
| Protein GI | 76810932 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.155167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAAAT CGTTCTCGTC AATCGAGATT AAATCTGTTC AAGAAGATCG GCGAGAGATA
GAGGGTATCG CCTCAACTCC GACGCCTGAC AGGGTAAATG ACGTGGTAGA GCCTCTGGGC
CTCACGTTCC AGAAAGAAAC GCCCCTCCTA CTTAATCACA AGTCCGACCA GCCTGTAGGC
ACGGTGCAAT TCGGCACGCC TACCGCTAAG GGACTTCCCT TCAAGGCAAA GATTGCGAAG
GTGGACGAAG AAGGCGTTGT GAAGCAGCGC ACCGACGAAG CGTGGCATAG CGTCAAGACG
CGCCTTATCA GGGGCGTCTC TATTGGGTTC ATCGCCAGGG CAACCAGCCC GCTCCCGAAT
GGTGGGACCC GGTTCACAAA AGCGGAAGTC CATGAGTTGT CGCTTACCGC GATTCCCGCT
AATCCGGAAG CAAAGATTAC GGGGTTCAAG GCACTTCCGG AAGTGCCTGA CAGCGCGCGG
TCGACCCTCG ACCTATCCAT CCTTCCGCCT GAACTTGCTG CGATGTACAC GGCGGGGTTG
GCGCGACGCG AAGCTGAGCA GAAGGCCGCC GAAGCAGCAC GTAAAGAGCA AGAAACCATC
AACACGAAAG AGGAAAACGA TATGCAGAAG ACGAACAACA CTAACCACAT TTTCATTCGC
GGCGCTATCG CGAAGGCCGT GACGATGGAG GGCGGGGCAG AGGGCTACGC GTCGATGCGG
TGGGGGGCGG GTTCGAAAAC GGTGGAGTAC ATCAAGGCGA TTGCTAGCCC CATGACGGCC
GGCGTAGACG GAAGCGGTGC ATTGACCTCA GGTACTTTGA GTCGCCAGCA GTTCGTCCAA
GCTGTGTTTA GTCATTCGAT CCTCGGGCAG CTTCGGGGGG TGATTCGTGT ACCGGCGATG
ACGCGCGTCA ATGTGGAAAA TGAGCCAACA GCCGCTGCGT TCTTCGGCCC CGGCGTGCCT
TGTCCGACTG CACAAGGCAC GTTCGGGGTG CATATGGCCG ACAAGCGGAA GATCGGCGTC
ACAGAAGTGA TCTCGGAAGA ACTCGCCCGT GCTACCGATG AAGCGGCTGA GGTAACTATT
AGTGCGATTC TCCAACGTGC CCTGAGTCGA GGGTTGGATA ACGCATTCAT TGGAAGCCAA
ACACGGGGCG AGGTTTCCCC TGCTGGCCTT GGGACGGTTG CAGTAAAAGC CGCAAATTTT
GAGGCAGGCC TTGAAGTGTT TACAGGCGAC CTGACCATGG CAAGTGTGAT TGTCAATCCA
CGTACAGCAG TCGCTTTGCG CAGCCCGACC GAAACTCAGA TTACCGCGAC CGGGGGCATC
TACAAGGGGC TGCCCGCAAT CGCATCATGC GCCGTTCCTC TGGGCAAACT TCTAATTGTG
GATGGTAGTC GGGTGCTGGC TCATATCGGA GACGTGGAGA TTCTCGCACT TCGTCATGCT
GACGTATACA CATTGCATGG AGGTGCGTCC CCCTCGGTCC CGGTCAACAT GTTTCAGACC
AATCAAGTAG CCCTCCAGGC GGGCCAGTAC GCAGACTGGG ATTTCGTTGA CGGTGCTGCT
ATTGAGGTTG GGGTCTAA
|
|---|
| Protein sequence | MQKSFSSIEI KSVQEDRREI EGIASTPTPD RVNDVVEPLG LTFQKETPLL LNHKSDQPVG
TVQFGTPTAK GLPFKAKIAK VDEEGVVKQR TDEAWHSVKT RLIRGVSIGF IARATSPLPN
GGTRFTKAEV HELSLTAIPA NPEAKITGFK ALPEVPDSAR STLDLSILPP ELAAMYTAGL
ARREAEQKAA EAARKEQETI NTKEENDMQK TNNTNHIFIR GAIAKAVTME GGAEGYASMR
WGAGSKTVEY IKAIASPMTA GVDGSGALTS GTLSRQQFVQ AVFSHSILGQ LRGVIRVPAM
TRVNVENEPT AAAFFGPGVP CPTAQGTFGV HMADKRKIGV TEVISEELAR ATDEAAEVTI
SAILQRALSR GLDNAFIGSQ TRGEVSPAGL GTVAVKAANF EAGLEVFTGD LTMASVIVNP
RTAVALRSPT ETQITATGGI YKGLPAIASC AVPLGKLLIV DGSRVLAHIG DVEILALRHA
DVYTLHGGAS PSVPVNMFQT NQVALQAGQY ADWDFVDGAA IEVGV
|
|---|
| |