Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1580 |
Symbol | mdcM |
ID | 3690620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1665428 |
End bp | 1666195 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637728036 |
Product | malonate transporter, M subunit |
Protein accession | YP_332984 |
Protein GI | 76809569 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00808] malonate transporter, MadM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.191573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGACA TGCTCGGAAA GGTCGTCGCG CACAACGGGC TCGTCGCGTC GTTCGCGCTC GTCGGCTGCG TCATGTTCGC GTCGGCGGCG CTGTCGAGGA AGCTCACGCT CGGCCGCGTG CACGGCTCGG CGATCGCGAT CGTGATCGGC CTCGCGCTCG CGTACGCCGG CGGCGCGTAC ACGGGCGGCG AGAAAGGTAT CGCCGACGTG CCGCTGTTCG CGGGCGTCGG CCTGATGGGC GGCGCGATGC TGCGCGATTT CGCGATCGTC GCGACGGCGT TCGAGGTGCA GCCCGCGCAA GCGCGCAAGG CGGGGCTCGT CGGCGCCGTG TCGCTGCTGC TCGGCACGGT GCTGCCGTTC ATTGTCGGCG CGAGCGTCGC GCGCGCGTTC GGCTATTCGG ACGCGGTCAG CATGACGACG ATCGGCGCGG GCGCCGTCAC GTACATCGTC GGCCCCGTGA CGGGCGCGGC GATCGGCGCG AGCTCCGACG TGATCGCGCT CAGCATCGCG ACAGGCCTCG TGAAGGCGGT CATCGTGATG GTCGGCACGC CGTTCGCGGC GGGCTTCATG GGGCTGCGCA CGCCGCGCGC GGCGATGATC TTCGGTGGGC TCGCGGGCAC CGTGAGCGGC GTGAGCGCCG GGCTCGCGGC GACCGACCGG CGGCTCGTGC CGTACGGCGC GCTGATCGCG ACGTTCCATA CGGGCGTCGG GTGTCTGCTC GGGCCGTCGC TATTGTTTTT CGCGACGAAG GCGGCGATGG GCGGGTGA
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Protein sequence | MIDMLGKVVA HNGLVASFAL VGCVMFASAA LSRKLTLGRV HGSAIAIVIG LALAYAGGAY TGGEKGIADV PLFAGVGLMG GAMLRDFAIV ATAFEVQPAQ ARKAGLVGAV SLLLGTVLPF IVGASVARAF GYSDAVSMTT IGAGAVTYIV GPVTGAAIGA SSDVIALSIA TGLVKAVIVM VGTPFAAGFM GLRTPRAAMI FGGLAGTVSG VSAGLAATDR RLVPYGALIA TFHTGVGCLL GPSLLFFATK AAMGG
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