| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1569 |
|---|
| Symbol | |
|---|
| ID | 3690953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1655591 |
|---|
| End bp | 1657066 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637728025 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_332973 |
|---|
| Protein GI | 76810564 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.180299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT ACGAAACGCT CGCCCGCGCG ATGGCCGACG ACATCCGGTC CGGCAACATC
ACGACCGGCA CGCGCATGCC GTCGCTGCGC CAGATGATCG CCCAGCATCG CGTCAGCCAA
TCGACCGTGT TTCGTGCTTA CTATCTGCTC GAGCAGTGGG GCTTGATTCG CGCGCGCGAA
CGCTCGGGCT ACTACGTCGC GCACGGCGCG CAGGCGAGCG TCCGCGCGAA CGGCATGAAC
GGCATGAATG GTGCGCACGC GACGCAAGAC GGCCGTCTCA CGCGCGATGC CGCGCCCGCC
GAATCGCGCA AGGTCGATAT CAGCGATCTC GTGTTCTCCG TGCTCGAGGC CGCGACGCAT
CCGCGCATCG TGCCGCTCGG CTCCGCGTTC GCCTCGCCGC ATCTGTTTCC GCTGCCGCGC
CTCGCGAAGT CGCTCGCGCA GGCCGCGCGG CTCGTGAGCC CGTGGAGCGC CGTAGTCGAT
CTGCCGCCCG GCAGCGAGCA GTTGCGCCGC CAGATCGCGT TGCGCTACCT CGGCATCGGC
GTGTCGCAGC CGATCGACGA GATCGTCGTG ACCAACGGCG CGCTCGAGGC GCTCAACCTG
TGCCTGACGG CCGTCACGCG CCCCGGCGAC GTGGTCGCCG TCGAAGCGCC TGGCTTCTAT
GCGGCGCTGC AGGCAATCGA GCGGCTCGAT CTGCGCGCGG TCGAGATTCC CGTCGATCCG
CGCACGGGCC TCGACCTCGG CGCGCTCGCC GCCGCGCTCG AACGCCACGA CGTGCGCGCG
TGCTGGTTCA TGACGAACTT CCAGAATCCG ACGGGCGTCA CGCTGTCGGC CGACAAGAAG
AAGGCGCTCG TCGACATGCT CGCCGCGCGC GAGGTGCCGC TCATCGAGGA CGACGTCTAC
GGCGAGCTGC ATCACGGGCC GGACTACCCG CTGCCCGCGC GCGCGTTCGA CAAGCACGGG
CTCGTCATGC ACTGCAGCTC GTTCTCGAAG ACGCTCGCGC CCGGCTACCG GATCGGCTGG
GCGGCGGCCG GGCGCTTCGC CGAGAAGGTG CAGCGGCTCA AGCTGATGAC GACGCTGTCC
GCGAGCATTC CCGCGCAGGT CGGCATCGCC GACTATCTCG AGCACGGCGG CTACGATCGG
CACCTGCGCA AGCTGCGCGG CGCGCTGCGC GGGCAGATGG AGCGGATGAA CGACGCGTTG
ATGCGCCATC TGCCGCCCGA CGTGCACTGG ACGCTGCCGG ACGGCGGCTA CTTCGTGTGG
CTGGAATTTC CCGACGCGAT CGACGCGATG GGGCTGCATC GCGAAGCGAT CCGGCGCGGC
GTGAGCGTCG CGCCCGGGCC GCTCTTCTCC GCCGCGCATG CGTTCGAGCG CTGCGTGCGG
ATCAACTTCG GCCACCCGTG GAGCGCCGCC GTCGACGACG CGATCCGCAC CGTCGGCGAG
CTGGTCGCGC AGCCGTCGGT GCGCAAGCGG CGCTGA
|
|---|
| Protein sequence | MKRYETLARA MADDIRSGNI TTGTRMPSLR QMIAQHRVSQ STVFRAYYLL EQWGLIRARE
RSGYYVAHGA QASVRANGMN GMNGAHATQD GRLTRDAAPA ESRKVDISDL VFSVLEAATH
PRIVPLGSAF ASPHLFPLPR LAKSLAQAAR LVSPWSAVVD LPPGSEQLRR QIALRYLGIG
VSQPIDEIVV TNGALEALNL CLTAVTRPGD VVAVEAPGFY AALQAIERLD LRAVEIPVDP
RTGLDLGALA AALERHDVRA CWFMTNFQNP TGVTLSADKK KALVDMLAAR EVPLIEDDVY
GELHHGPDYP LPARAFDKHG LVMHCSSFSK TLAPGYRIGW AAAGRFAEKV QRLKLMTTLS
ASIPAQVGIA DYLEHGGYDR HLRKLRGALR GQMERMNDAL MRHLPPDVHW TLPDGGYFVW
LEFPDAIDAM GLHREAIRRG VSVAPGPLFS AAHAFERCVR INFGHPWSAA VDDAIRTVGE
LVAQPSVRKR R
|
|---|
| |