Gene BURPS1710b_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1484 
Symbol 
ID3690595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1558129 
End bp1559274 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID637727940 
ProductABC-type transporter periplasmic sulfonate-binding protein 
Protein accessionYP_332888 
Protein GI76808686 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCCCGT TTGCGCGCGC CGACGATGAT GAAGACGGAT GCGCGACGTG GCCGCGCGAT 
CGCGGATCAC GCCGCGGCGC GGCGCATCGC GCGCGACAAC CGCATCGACC GACGAACCAC
ATGACCGCTG ACGACACGCC TCGCACCGCC CTTTCCCCCT CCGCTCACGA CGATACGCGC
CGCTCGCTGC TGAAAGCAGC GGGCGCCGTC GCACTCGCCG CGCCGCTGTC CGGCGGCCTC
GCCGCGCTAT CGGCGAGCGG CGCCGCCCAC GCGCAACGCA GTGCGAAAAC ACTGCGCATC
GGTTACCAGA AGTACGGCAA CTTCGTCGTC CTGAAAGCGC GCGGCTCGCT CGAGAAGCGG
CTCGCGGATC GGCATGTGTC GGTCCAGTGG ATCGAGTTTC CGGGCGGCCC GCAATTGCTC
GAAGGCCTGA ACGCCGGCGC GATCGACGTC GGCACGGTCG GCGAAACGCC GCCCGTGTTC
GCGCTCGCGG CGGGCGTCGA TTTCGTCTAC GTCGGCAGCG AACCGCCCGC GCCATTAGGC
GAAGCCATCG TCGTGCCGCA CGATTCGCCG ATTCGCGCCG TCGCCGATCT GCGCGGCAGG
AAGATTGCGC TCAACAAGGG CTCGAATGTT CACTACCTGC TCGTGAACGC GCTGCGGCGC
GCGAAGATCG ATTACCGCGA CATCACGCCC GTCTACCTCG CGCCCGCCGA TGCACGCGCG
GCATTCGCGC AGCGCGGCGT CGACGCCTGG GTGATTTGGG ACCCTTATCT TGCGGCGATC
GAGCGTCAGA CGAACGCGCG CGCGATCGCG AATGGCGAAG GGCTCGTGAA CAACATCCAA
TACTATCTCG CGAGCCGTAC GTTCGCCGAA GCCGAGCCGC AGCTCGTGCG CGCGCTGCTC
GACGAAGTCG GCGCGGTCGA TCGTTGGGCG CGCGCGAATG TCGCCACTGT CGCCGCCCAG
CTTTCGCCGC TCGTCGGGCT CGACACGGCA ACGCTCGAAC ACGCGTTGAA GCGCGCGAGC
TATGGCGTGC AACCGATCGA CGACGCCGCG CTCGCGTATC AGCAGCGAAT CGCCGACACG
TTCACCGCCC TCAAGCTGAT TCCGCGCAGG ATCGACGTCG CCGCCGCGCG CTGGCAAGCG
GCATAG
 
Protein sequence
MTPFARADDD EDGCATWPRD RGSRRGAAHR ARQPHRPTNH MTADDTPRTA LSPSAHDDTR 
RSLLKAAGAV ALAAPLSGGL AALSASGAAH AQRSAKTLRI GYQKYGNFVV LKARGSLEKR
LADRHVSVQW IEFPGGPQLL EGLNAGAIDV GTVGETPPVF ALAAGVDFVY VGSEPPAPLG
EAIVVPHDSP IRAVADLRGR KIALNKGSNV HYLLVNALRR AKIDYRDITP VYLAPADARA
AFAQRGVDAW VIWDPYLAAI ERQTNARAIA NGEGLVNNIQ YYLASRTFAE AEPQLVRALL
DEVGAVDRWA RANVATVAAQ LSPLVGLDTA TLEHALKRAS YGVQPIDDAA LAYQQRIADT
FTALKLIPRR IDVAAARWQA A