Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1484 |
Symbol | |
ID | 3690595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 1558129 |
End bp | 1559274 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637727940 |
Product | ABC-type transporter periplasmic sulfonate-binding protein |
Protein accession | YP_332888 |
Protein GI | 76808686 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCCCGT TTGCGCGCGC CGACGATGAT GAAGACGGAT GCGCGACGTG GCCGCGCGAT CGCGGATCAC GCCGCGGCGC GGCGCATCGC GCGCGACAAC CGCATCGACC GACGAACCAC ATGACCGCTG ACGACACGCC TCGCACCGCC CTTTCCCCCT CCGCTCACGA CGATACGCGC CGCTCGCTGC TGAAAGCAGC GGGCGCCGTC GCACTCGCCG CGCCGCTGTC CGGCGGCCTC GCCGCGCTAT CGGCGAGCGG CGCCGCCCAC GCGCAACGCA GTGCGAAAAC ACTGCGCATC GGTTACCAGA AGTACGGCAA CTTCGTCGTC CTGAAAGCGC GCGGCTCGCT CGAGAAGCGG CTCGCGGATC GGCATGTGTC GGTCCAGTGG ATCGAGTTTC CGGGCGGCCC GCAATTGCTC GAAGGCCTGA ACGCCGGCGC GATCGACGTC GGCACGGTCG GCGAAACGCC GCCCGTGTTC GCGCTCGCGG CGGGCGTCGA TTTCGTCTAC GTCGGCAGCG AACCGCCCGC GCCATTAGGC GAAGCCATCG TCGTGCCGCA CGATTCGCCG ATTCGCGCCG TCGCCGATCT GCGCGGCAGG AAGATTGCGC TCAACAAGGG CTCGAATGTT CACTACCTGC TCGTGAACGC GCTGCGGCGC GCGAAGATCG ATTACCGCGA CATCACGCCC GTCTACCTCG CGCCCGCCGA TGCACGCGCG GCATTCGCGC AGCGCGGCGT CGACGCCTGG GTGATTTGGG ACCCTTATCT TGCGGCGATC GAGCGTCAGA CGAACGCGCG CGCGATCGCG AATGGCGAAG GGCTCGTGAA CAACATCCAA TACTATCTCG CGAGCCGTAC GTTCGCCGAA GCCGAGCCGC AGCTCGTGCG CGCGCTGCTC GACGAAGTCG GCGCGGTCGA TCGTTGGGCG CGCGCGAATG TCGCCACTGT CGCCGCCCAG CTTTCGCCGC TCGTCGGGCT CGACACGGCA ACGCTCGAAC ACGCGTTGAA GCGCGCGAGC TATGGCGTGC AACCGATCGA CGACGCCGCG CTCGCGTATC AGCAGCGAAT CGCCGACACG TTCACCGCCC TCAAGCTGAT TCCGCGCAGG ATCGACGTCG CCGCCGCGCG CTGGCAAGCG GCATAG
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Protein sequence | MTPFARADDD EDGCATWPRD RGSRRGAAHR ARQPHRPTNH MTADDTPRTA LSPSAHDDTR RSLLKAAGAV ALAAPLSGGL AALSASGAAH AQRSAKTLRI GYQKYGNFVV LKARGSLEKR LADRHVSVQW IEFPGGPQLL EGLNAGAIDV GTVGETPPVF ALAAGVDFVY VGSEPPAPLG EAIVVPHDSP IRAVADLRGR KIALNKGSNV HYLLVNALRR AKIDYRDITP VYLAPADARA AFAQRGVDAW VIWDPYLAAI ERQTNARAIA NGEGLVNNIQ YYLASRTFAE AEPQLVRALL DEVGAVDRWA RANVATVAAQ LSPLVGLDTA TLEHALKRAS YGVQPIDDAA LAYQQRIADT FTALKLIPRR IDVAAARWQA A
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