| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1438 |
|---|
| Symbol | nuoD |
|---|
| ID | 3691159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 1511238 |
|---|
| End bp | 1512491 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637727894 |
|---|
| Product | NADH dehydrogenase subunit D |
|---|
| Protein accession | YP_332847 |
|---|
| Protein GI | 76808606 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.09225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA TCAAGAATTA CACGCTCAAC TTCGGTCCGC AGCACCCGGC CGCGCACGGC
GTGCTGCGCC TCGTGCTCGA GCTCGACGGC GAAGTGATCC AGCGCGCCGA TCCGCACATC
GGCCTGCTGC ACCGGGCAAC CGAGAAGCTC GCCGAGAACA AGACGTTCAT CCAGTCCGTG
CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTGA ACGAACACGG TTACGTGCTC
GCGATCGAGA AGCTGCTCGG CATCGAGGTG CCGGAACGCG CGCAATACAT CCGCGTGCTG
TTCGACGAAA TCACGCGCGT GCTGAACCAC CTGATGTGGA TCGGCGCGCA CGCGCTCGAC
GTCGGCGCGA TGGCGGTGTT CCTGTATGCG TTCCGCGAGC GCGAGGACCT GATGGACGTG
TACGAGGCGG TGTCCGGCGC GCGCATGCAC GCGGCGTACT ATCGTCCGGG CGGCGTCTAT
CGCGATCTGC CGGAAGCCAT GCCGCAGTAC AAGGCGTCGA AGATTCGCAA CGAACGTGCG
CTCGCGAAGA TGAACGAGGC GCGCTCGGGT TCGGTGCTCG ATTTCATCGA CGATTTCTTC
ACGCGCTTTC CGAAGTGCGT CGACGAATAC GAAACGCTGC TGACCGACAA CCGGATCTGG
AAGCAGCGTC TCGTGGGCAT CGGCGTCGTG TCGCCGGAGC GCGCGCTGCA GCTCGGCCTG
ACGGGGCCGA TGATCCGCGG CTCCGGTATC GCATGGGATC TGCGCAAGAA GCAGCCGTAC
GAAGTGTACG ACCGCCTCGA CTTCGATATC CCCGTCGGCG TGAACGGCGA TTGCTACGAC
CGCTATCTGG TGCGCGTCGA GGAGATGCGC CAGTCGACGC GTATCGCGAA ACAATGTATT
GAGTGGCTTC GCAAGAATCC CGGCCCCGTG ATCACCGACA ATCACAAGGT CGCGCCGCCG
TCGCGTGTCG GCATGAAGAC GAACATGGAG GATCTGATCC ACCATTTCAA GCTCTTCACC
GAAGGTTTTC ACGTGCCCGA GGGCGAGACG TACGCCGCCG TCGAGCATCC GAAGGGCGAA
TTCGGCATCT ATCTGGTGTC GGACGGCGCG AACAAGCCGT ACCGGCTCAA GATTCGCGCG
CCGGGCTACG CCCATCTGTC CGCGCTCGAC GAAATGGCGC GCGGGCACAT GATCGCCGAC
GCCGTCACGA TCATCGGGAC GCAGGACATC GTGTTCGGCG AAATCGACCG CTGA
|
|---|
| Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AENKTFIQSV
PYMDRLDYVS MMVNEHGYVL AIEKLLGIEV PERAQYIRVL FDEITRVLNH LMWIGAHALD
VGAMAVFLYA FREREDLMDV YEAVSGARMH AAYYRPGGVY RDLPEAMPQY KASKIRNERA
LAKMNEARSG SVLDFIDDFF TRFPKCVDEY ETLLTDNRIW KQRLVGIGVV SPERALQLGL
TGPMIRGSGI AWDLRKKQPY EVYDRLDFDI PVGVNGDCYD RYLVRVEEMR QSTRIAKQCI
EWLRKNPGPV ITDNHKVAPP SRVGMKTNME DLIHHFKLFT EGFHVPEGET YAAVEHPKGE
FGIYLVSDGA NKPYRLKIRA PGYAHLSALD EMARGHMIAD AVTIIGTQDI VFGEIDR
|
|---|
| |