Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1396 |
Symbol | kdpD |
ID | 3690504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1467658 |
End bp | 1470639 |
Gene Length | 2982 bp |
Protein Length | 993 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637727852 |
Product | two-component system, sensor kinase protein KdpD |
Protein accession | YP_332806 |
Protein GI | 76812161 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.201035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGTC CCGATCCTGA CCAACTCCTC GACAAGATCC AGCGGGAGGA GGAAAAGCAG CAGCGCGGCA GGCTGAAGAT CTTCTTCGGC GCGTCGGCGG GCGTCGGCAA GACCTATGCG ATGCTGCTCG CCGCGCGCGC GCGCAAGCAG GAGGGCGTCG ACGTCGTCGT CGGCATCGTC GAGACGCACG GGCGCAGCGA GACGGCGGCG CTGCTCGACG GGCTCGACGT GCTGCCGCTC ATGCAGATCG AGTATCGCGG CCGCACGATC GGCGAGTTCG ATCTCGACGC GGCGCTCGCG CGCAGGCCCC GGCTCGTCCT CGTCGACGAG CTCGCGCACT CGAACGTGCC GGGCGCGCGC CACCTGAAGC GCTGGCAGGA TGTGTACGAG CTGCTCGACG CGGGCATCGA CGTCTACACG AGCGTCAACG TCCAGCATCT CGAGAGCCTG AACGACGTGG TCGGCGCGAT CACGGGCATT CGCGTGTGGG AGACCGTGCC CGACCGCGTG TTCGACGCGG CCGACGAAGT CACGCTCGTC GATCTGCCCG CCGAGGAATT GCTGAGCCGG TTGCGCGAAG GCAAGGTCTA CATGGCGCAG CAGGCCGAGC GGGCGGTGCG CAACTTCTTC CGCAAGGGCA ACCTGATCGC GCTGCGCGAG CTCGCGCTGC GCCGCACGGC CGACCGCGTC GACGCGCAGA TGCGCGAGTA CCGCGCGGAC CGCTCGATCC AGCGCATCTG GCAGGCGCGC GAGCGCCTGC TCGTATGCGT GGGGCCGGGC GCCGAGGCGC CGACGCTCGT GCGCGCGGCC GCGCGCCTCG CCGCGAGCCT GAAGGCCGAC TGGCTCGCGG TGTACGTCGA GACGCCGCGG CTCGCGCGGC TGCCCGACGC GCTCCGGCAG CGCACGCTCA ATGCACTGAA GCTCGCGGCC GAGCTCGGCG CCGAGACGGC GACGCTCACG GGCGCGGACG CGGTCGCCGC GCTGATCGGC TACGCGCAGG TGCGCAACGC GTCGAAGATC GTCGCGGGCG GCTCGTCGAA GACGGGCTTC CTGCGCCGCT TCTCGCGCCC GTTCGGCGAG CAGCTCGCGG AGCGCGCGGG CGACCTCGAC CTGATGCTGA TCCGCGCGTC GGCGAGCGAG GATGCGCGCG CGCCGCTCGA CGCGCGCGCG CGCGCGTGGC GCGACGCGTT CTCGAGCGTC GTCGACGGCC GTTCGCCGCC GCGCCACTAC GGCTACGCGG CCGCGATCTG CGCGCTGATC ACGGGCGCCG CGAACCTGCT GCAGGGCCAT CTCGACCTCA CGAATCTCGT GATGCTGTAC CTGCTCGGCG TCGTGTTCTC GGCGGTGCGC CTCGGGCGTG GGCCGGGCGT CGTGCAGTCG TTCCTGTCGG TCGCCGCGTT CGACTACTTC TTCGTGCCGC CGCGGATGTC GTTTTCCGTG ACGGACACGC AGTATCTGCT GACCTTCTTC GGGATGTTGC TCACGTCGCT CGTGATCAGC CATCTGACGT CGAGCCTCAC GCGCGGCGCG GCGATCGCGC AGCGCCGCGA GCGGCGCACG AGCGCGATGT ATGCGATGGC GCGCGAGCTC GCGGCGGCGC TCACGGCCGA GCAGATCGTC GAGATCGGCA GCCGGCACGT GTCCGAGGTG TTCCGCGCGC GCGTCGCGAT GCTGCTGCCG GACAGCGGCG ACAAGGTCCG GCAGAAGATC GAGAACCCCG ACGAGGCGGT GACGATCACC GGCGCGGCGC TCGATATCGA CGTCGGCCAA TGGGTGTACG ACCAGCAGAA GCCGGCCGGA CACGGCACCG ACACGCTGCC CGCGGCCGCC GCGCTCTATC TGCCGCTGAA GGCGCCGATG CGCACGCGCG GCGTGCTCGC CGTGGTCACG AAGGATCCGG GCGAGCTCGA GGTGCCCGAG CAGCGGCGGA TGCTCGACGC GTTCGCCGCG CAGATCGCGC TCGCGGTCGA GCGCGTCCAC TATGTCGAGA TCGCGCGCGA CGCGCTCGTC AACATGGAAT CGGAGCGGCT GCGCAACTCG CTGCTGTCGG CGATCTCGCA CGATCTGCGC ACGCCGCTCA CGGCGATCGT CGGGCTGTCG TCGATGCTCG CGAACGCGCG CGGCGCGACG CGCGAGGGCT CGCCCGCGCG CGAGGACGAG CTCGTCGACG CGATTCACGA CGAGGCGCTC AGGATGACGG GGATCGTCAC GAACCTGCTC GACATGGCGC GGTTGCAGGC GGGCAGCCTG CAACTGAAAC GCCAGTGGTC GCTGCTCGAG GAGACGGTCG GCGCGGCGCT CGCCGCGTGC AAGCGCGTGC TCGCGCGCCA TCCGGCGCGC GTGCGGCTGC CGGCCGACTT GCCGCTCCTG CAGACGGACG CGGTGCTGAT GGAGCGGCTT TTCGCGAACC TGTTCGAGAA CGCGGCGAAG TACACGCCGC TCGACACGCC GATCGAGATC GGCGCGGAGC GCATCGTCGA CGACGGCCGG CCGTTCGTGC GCGTGTTCGT CGACGACCAC GGCCCCGGGC TGCCGGCCGG GATGGAGGCG CGGATCTTCG AGAAGTTCAC GCGCGGCGAG AAGGAATCGG CGACGCCCGG CATCGGCCTC GGGCTCGCGA TCTGCCGCGC GATCGTCGAC GCGCACGGCG GTAAAATCGG TGCGCTCAAC CGGCTCGGGC CGGATGGCCG GGTCGAGGGC GCGCGTTTCT GGTTCACGCT GCCCGTCGAC ACGCCGCCGC CCGAGCCCGG CGCCGGCGAC GAGGCGCCGG ATGACGACGC GGGCGCGGCG GCGGACGCGA GCGGCATGCG TGATGCGGGG CGCGCGGCCG GCAGGCGCAT CGCCGGCGAG CGCGTCGCCG GCGAGCGTGC GTTCGCCGCG GCGGCTCGCC CGGTGCCCGG CCAGGCCGCC GCGGCGGACG CGCCGCGCCG CGACGGCGGT GCGCCGCCGC TATCCAACGA ACCACCGCAT GCCCATGAGT GA
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Protein sequence | MNRPDPDQLL DKIQREEEKQ QRGRLKIFFG ASAGVGKTYA MLLAARARKQ EGVDVVVGIV ETHGRSETAA LLDGLDVLPL MQIEYRGRTI GEFDLDAALA RRPRLVLVDE LAHSNVPGAR HLKRWQDVYE LLDAGIDVYT SVNVQHLESL NDVVGAITGI RVWETVPDRV FDAADEVTLV DLPAEELLSR LREGKVYMAQ QAERAVRNFF RKGNLIALRE LALRRTADRV DAQMREYRAD RSIQRIWQAR ERLLVCVGPG AEAPTLVRAA ARLAASLKAD WLAVYVETPR LARLPDALRQ RTLNALKLAA ELGAETATLT GADAVAALIG YAQVRNASKI VAGGSSKTGF LRRFSRPFGE QLAERAGDLD LMLIRASASE DARAPLDARA RAWRDAFSSV VDGRSPPRHY GYAAAICALI TGAANLLQGH LDLTNLVMLY LLGVVFSAVR LGRGPGVVQS FLSVAAFDYF FVPPRMSFSV TDTQYLLTFF GMLLTSLVIS HLTSSLTRGA AIAQRRERRT SAMYAMAREL AAALTAEQIV EIGSRHVSEV FRARVAMLLP DSGDKVRQKI ENPDEAVTIT GAALDIDVGQ WVYDQQKPAG HGTDTLPAAA ALYLPLKAPM RTRGVLAVVT KDPGELEVPE QRRMLDAFAA QIALAVERVH YVEIARDALV NMESERLRNS LLSAISHDLR TPLTAIVGLS SMLANARGAT REGSPAREDE LVDAIHDEAL RMTGIVTNLL DMARLQAGSL QLKRQWSLLE ETVGAALAAC KRVLARHPAR VRLPADLPLL QTDAVLMERL FANLFENAAK YTPLDTPIEI GAERIVDDGR PFVRVFVDDH GPGLPAGMEA RIFEKFTRGE KESATPGIGL GLAICRAIVD AHGGKIGALN RLGPDGRVEG ARFWFTLPVD TPPPEPGAGD EAPDDDAGAA ADASGMRDAG RAAGRRIAGE RVAGERAFAA AARPVPGQAA AADAPRRDGG APPLSNEPPH AHE
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