| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1383 |
|---|
| Symbol | hemF |
|---|
| ID | 3689528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1454345 |
|---|
| End bp | 1455325 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637727839 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_332793 |
|---|
| Protein GI | 76810740 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.461453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGCA GAAGCATTTT TCGACGGCGT CCGCCAAGCG GATGCCGCCC CACACCGATG
ACCGATTCGA CTTACGACGT CAACCGAGTA CGCGCTTACC TGCAAGGGCT GCAGATGCGC
ATCGCCGATG CGCTCGGCGC CTTCGACGGC ACGCCGCTCG CCGCCGACAC GTGGCGGCGC
GGCCCCGGCG AGCGGCTGCG CGGCGGCGGC TGCACGCGCA TTCTCGAGGC AGGCGGCTTC
TTCGAGCGCG CGGGCATCGG CTTTTCCGAC GTCGCGGGCG ACGCGCTGCC GCCGTCGGCG
AGCGCATCGC GCCCGCAGCT CGCCGGGCGC GGCTTCGAGG CGCTCGGCGT ATCGCTCGTG
CTGCACCCGC GCAATCCGTA CTGCCCGACC GTCCACATGA ACGTGCGGAT GCTGATCGCG
ACGAAGCCGG GCGAGGCGCC CGTGTTCTGG TTCGGCGGCG GCATGGATCT GACGCCGATT
TACGGCTTCG AAGAGGATGC ACGGCACTTC CACCGCACGT GCCGCGCGGC GCTCGAGCCG
TTCGGCGCCG AGCTGTACCC GCGCTTCAAG AAATGGTGCG ACGACTATTT CTTCCTGAAA
CATCGCAACG AGGCGCGCGG GATCGGCGGC ATCTTCTTCG ACGACTTCTC CGAGCTCGGC
TTCGAACGCT CGTTCGAGAT GCTGCAAAGC GTCGGCGACG CGTTCCTGCC GTCGTACCTG
CCGATCGTCG AGCGCCGCCG CGACACGCCG TACGGCGAGC GCGAGCGCGC GTTCCAGGCA
TACCGGCGCG GCCGCTACGT CGAGTTCAAC CTGGTGTTCG ACCGCGGCAC GCTGTTCGGG
CTGCAAAGCG GCGGGCGCAC CGAGTCCATC CTGCTGTCGA TGCCGCCGAC GGCGGGCTGG
CGCTATGACT GGCATCCGGA CCCGGGCACG CCCGAAGCAC GCCTGCAAAG CGAGTTCCTC
GTGCCGCGCG ACTGGGCATG A
|
|---|
| Protein sequence | MPGRSIFRRR PPSGCRPTPM TDSTYDVNRV RAYLQGLQMR IADALGAFDG TPLAADTWRR
GPGERLRGGG CTRILEAGGF FERAGIGFSD VAGDALPPSA SASRPQLAGR GFEALGVSLV
LHPRNPYCPT VHMNVRMLIA TKPGEAPVFW FGGGMDLTPI YGFEEDARHF HRTCRAALEP
FGAELYPRFK KWCDDYFFLK HRNEARGIGG IFFDDFSELG FERSFEMLQS VGDAFLPSYL
PIVERRRDTP YGERERAFQA YRRGRYVEFN LVFDRGTLFG LQSGGRTESI LLSMPPTAGW
RYDWHPDPGT PEARLQSEFL VPRDWA
|
|---|
| |