Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1317 |
Symbol | |
ID | 3688350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1384726 |
End bp | 1386180 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637727773 |
Product | GntR family transcriptional regulator |
Protein accession | YP_332727 |
Protein GI | 76810993 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.231093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCG TCCCGCTTGC GCAGATCCCC GCGCCGCACG ATACCGCGAC GCTCACGCTC GTCGATCAGC TCGTGCAATG GGCGCGCCGC CGGATCGACG AGCGCGTGTT CCGGCCCGGC ATGCGGATGC CGTCGATCCG CAAGCTCGCG CTCGACAAGA GCGTGTCGCG CTTCACGGTC GTCGAGGCGT ACGAGCGGCT CGTCGCGCAG GGTTATCTCG ATTCGCGGCG CGGCTCCGGC TTCTACGTGC GCGAGCGCGC GCCCGGGCAG CAGCCGGTGG GCGCATCGGG CGGCGCGCGC GCGCAGCCCG TGCACAACAC GATCGACGTC GTCTGGCTGC TGCGCAACAT GCTGCACACG GTCAGCCCGG AAAAGGGGCC GGGGCTCGGC TATCTGCCGA GCCGCTGGCT CGACGGCGAA CTGATCACGA GCGCGTTGCG CGCGCTCGGC CGGCAATCGG GCGCGCAGAT GCTCGGCTTC GGCAGCGCGC AGGGCTTCCT GCCGCTGCGG CAGCAACTGC AGACGCGCCT CGCCGAATTC GAGATCGGCG CGACGCCCGA TCAGCTCGTG CTCGTGTCCG GCATCACGCA GGCGATCGAT CTGATCGCGC GCCACTGCGT GCGCCCGGGC GACGCGGTGA TCGTCGGCGA TCCGGCCTGG TTCCAGATGT TCGGGCGCTT CGCGTCGCAG GGCGCGCAGC TCGTCGGGAT GCCGTACACG CCGGACGGCC CCGATCTCGA CGCGCTCGAG AACCTCGTGC AGATGTGGCG CCCGAAGATG CTCGTGATCA ACTCGGTGCT GCACAATCCG ACGGGCACGT CGCTGTCGGC CGCGCAGGCG TTCCGGATCC TGAAGCTCGC GGAGGCGTAC GATTTCCTCG TCGTCGAGGA CGACGTCTAC GGCGACCTGT GCCCGCCGAG CTATCCGGCG ACGCGCCTGG CGAGCCTCGA CCAGTTAAGG CGCGTGATCT TCCTCGGCAG CTTCTCGAAG ACGCTCGCCG CGAACCTGCG GGTCGGCTAC ATCGCGTGCG CGCCGGAACT CGCGAAGGCG CTGACGGATC AGAAAATGCT CGTCGGGATG ACGACGCCCG AGCTCAACGA GCGCGTGCTG TACAAGGTGC TCACGGAAGG GCACTACCGG CGCCACGTCG AGCGGCTGCG CGCGCGGCTC GACGGCGTGC GCGACAAGAC CGCGCGGATG CTCGAGCGCA CCGGCATGCG GCTCTTCACG ATGCCGGCGG CGGGGATGTT CCTGTGGGCC GACACGGGCG TCGATTCGGA CGCGCTCGCC GCGGCCGCGC ACGAGGAAGG TTTCCTGCTC ACGCCGGGGA GCCTCTTCTC GCCGCAGCAG TCGCCTTCGA CGTGGACGCG TTTTAACGTC GCGAACTGCG GCGATCCGGC GCTGCCCGCG TTCCTCGGCC GCTATCTCGA CAGCGTGAAC CGCCGCGCCT CTTGA
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Protein sequence | MSTVPLAQIP APHDTATLTL VDQLVQWARR RIDERVFRPG MRMPSIRKLA LDKSVSRFTV VEAYERLVAQ GYLDSRRGSG FYVRERAPGQ QPVGASGGAR AQPVHNTIDV VWLLRNMLHT VSPEKGPGLG YLPSRWLDGE LITSALRALG RQSGAQMLGF GSAQGFLPLR QQLQTRLAEF EIGATPDQLV LVSGITQAID LIARHCVRPG DAVIVGDPAW FQMFGRFASQ GAQLVGMPYT PDGPDLDALE NLVQMWRPKM LVINSVLHNP TGTSLSAAQA FRILKLAEAY DFLVVEDDVY GDLCPPSYPA TRLASLDQLR RVIFLGSFSK TLAANLRVGY IACAPELAKA LTDQKMLVGM TTPELNERVL YKVLTEGHYR RHVERLRARL DGVRDKTARM LERTGMRLFT MPAAGMFLWA DTGVDSDALA AAAHEEGFLL TPGSLFSPQQ SPSTWTRFNV ANCGDPALPA FLGRYLDSVN RRAS
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