Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1298 |
Symbol | abcZ |
ID | 3688951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1360140 |
End bp | 1363337 |
Gene Length | 3198 bp |
Protein Length | 1065 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637727754 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_332708 |
Protein GI | 76811064 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.524137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTCGAA TTCGTTCGAG CCGGTGTGCT CGGGGCCGGC GTGTCGCGGG GCGGGGCGCG CCGGCGCGCG GAAATGACGA GGACTTCTCG CGCGGCCGTC GCCCGCCGCG CGACGCGAGC CTCAGAATTC CACGACGACG AAATCTTCCT TGCCGACATC GCACAGCGGG CAGCGCCAGC CGTGCGGAAT GTCGGCGAAG CGGGTGCCGG CCGCGATGCC TTCGTCCGGC AGCCCTTCCG CTTCGTTATA GATCCAGCCA CAAATCAGGC AGACCCAGCT CTTGTATTCG ACGACTTCGC TCATGTTGCA CTCTTGAAGA ACCATTGCAT TCGACGTCGC CCGATCGCGC GAACGCGGCA TATCGGGCGA CGCAACACGC AATGGTACCG GATTTGCCGC GCCCGCCCGT CCGAGCGCGC CGCAGCCTCA TCGCCGACTG CCGACTGCCA ACCGCCAACC GCCGATCGCC GTCCACCGCC GATGCGACGG ATGCCTCAAC CGCCCCGCAT GCCGCGAGCG TTCCGCACGT GGGGCGCCCG CCGCCTGGGC GCGCCCTGTC GGCGCATCGT ACGGCCCGGC GCTTGCCCGC GCGCTCGGCG CGCGCGCCAA ACCCGCCACG CGCGGAGCGT GCGCGGTGTA TCCTTCGATG GCCTTTCAAC CCAAAAGGAG AGAGCAATGC TCTACAACAA GTGGCTGGCC GGCGCATTCA CCGCGGCCGC GCTCTTCGCG TCCGCCTCGG CGCACGCGGA AGCGAGGGTG TATTTCGTCG AGCCGGCCGA CGGCGCGTCC GTCTCGAGCC CCGTTCACGT GAAATTCGGT CTCGAAGGCG ACATCGTGCT TCGGCCCGCG GGCGACATGA CGCCCCACAC CGGTCACCAC CACCTGCTGA TCGACGGCAA GCCGGTGGCC AGAGGCGACG TGATTCCCGC CAACGATCAC TCGCTGCATT TCGGCAAGCC TCAGACCGAG ACGGAGGTGA GGCTGTCGCC CGGTCGGCAC ACGCTGACGC TGCAGTTCGG CGATGGCGCG CACCGCTCGT ACGGCCCGGA GATGAGCCAG ACCATCACGG TCAACGTCAA GTAGGCCATC GGGCTGGCGA GGGCCGAGCA AGGTTCCCGC CAGCCCGCGC CGCCGGTCGC CGTGCGCGCG CCGGCGTTGC GCGTTTCGCG CCCGGCCATT GTGCCGTATC GGCGCCGTGC GCCGCCCCCG GTACAATGGG CGCTTCCGAT TTTTTCTCCG CCGTCTTCCC CATGTCGCTT TATTCCATTA CCGGCGCGCA ACTCGCGTTC GGCCACGTCG CGCTGCTCGA TCACGCGGAC TTCTCGCTCG AAGCCGGCGA GCGCGTCGGG CTCATCGGCC GCAACGGCGC CGGCAAGTCG TCGCTGCTGA AGATCGTCGC GGATCTGGCG AAACCCGACG ACGGCCTCGT CACGCGGCAG CAGCACCTCG TGACGGTCTA TGTGCCGCAG GAGCCGGAAT TCGCCGCCGG GCAGACGGTG TTCGACGCGG TGGCCTCCGG GCTGACCGAT ACGCGCGCGC TGCTCGCCGA ATACGACGAG ATCGCGCACC GGCTCGCCGA TACGCCCGAA GGCGCCGAGC ACGACGCGCT GCTTGCGCGG ATGAACGCGC TGCAATCGTC GCTCGACGCG ACGGACGCGT GGAACTGGCG CACGCGGGTG GCGACGACGC TCGCGCAGAT CGGGCTCGAC GGCGATACGA AGATCGACGC GCTGTCGGGC GGGATGCAGA AGCGCGCCGC GCTCGCGCGC GCGCTCGTCG TGCAGCCGGA CGTGCTGCTC CTCGACGAGC CGACCAACCA TCTCGATTTC GACGGCATTC GCTGGCTCGA GGAACTGCTC GTCGCGCAGC GCGCGGGCCT GTTCTTCATC ACGCACGATC GCGCGTTTCT CGATCGCGTC GCGACGCGCA TCGTCGAGCT CGACCGCGGC CGCCTGCTGT CGTATCCGGG CAACTTCTCC GCGTATCAGA CGCGCAAGGC GCAGCAGCTC GAGGTCGAGC GCGTCGAGAA CGAGAAGTTC GACAAGCTGC TCGCGCAGGA GGAGGTGTGG ATCCGCAAGG GCGTCGAGGC GCGGCGCACG CGCAGCGTCG GCCGCGTCGC GCGGCTCGAG CAGATGCGCC GCGAGCGCGC GGAGCGCCGC AACGCGCAAG GCAACGTGAG GCTCGACGTC GCGCAGGGCG AGAAATCGGG CAAGATCGTC GCGGAGCTGA CCGACGTGAC GAAGCGCTAC GGCGAGCGCA CGGTCGTCGA GCGCTTCTCG GCCACGGTGA TGCGCGGCGA CAAGATCGGC TTCGTCGGCC CGAACGGCGC GGGCAAGACC ACGCTGCTCA AGCTGATCCT CGGCGAACTG AAGCCCGACG CGGGCACGGT GCGCACGGGC ACGAACCTGC AGGTCGCGTA TTTCGACCAG ATGCGCGCGC AACTCGATCA GGAGAAGAGC CTCGCGGACA CGATCAGCCC CGGCAGCGAG TGGGTCGAGA TCGGCGGCGT GCGCAAGCAC GTGATGAGCT ATCTGGGCGA CTTCCTGTTC GCGCCCGAGC GCGCGCGCTC GCCCGTCAAG TCGCTGTCGG GCGGCGAGCG CAACCGGCTG CTGCTCGCGC GCCTGTTCGC GCGCCCGGCC AACGTGCTCG TGCTCGACGA GCCGACCAAC GACCTCGACA TCCCGACGCT CGAACTGCTC GAAGAGCTGC TGACCGATTA CGACGGCACG GTGCTGCTCG TCAGCCACGA TCGTGCGTTT CTCGACAACG TCGTCACGTC GGTGATCGCC TCGGAGGGCA ACGGCCTGTG GCGCGAATAC GTCGGCGGCT TCACCGATTG GCAGATCCAG CGCGAGCGCG CGCAGCGGAT CGCGCACGAG GAGGCGGCCA AGCGCGCGGC GAAGGAGCCC GCGAGCGCGA AGGACGACGC GCCCAAGGGC GCGGCGGGCC GCAATGCGCA GCGCACGGTC AAGCTGTCGT TCAACGAGCA GCGCGAGCTC GACGCGCTGC CCGCGAGGAT CGCGGCGCTC GAGGCCGAGC AGAAGGCGAT TGCCGCGCAG CTCGAGGACG GCTCGATCTT CTCGAAGGAT CCGCAGGAGG GCACGCGCCT GACCGAGCGC TTCGCGGCGC TCGACGACGA GCTGCTCGCG GCGCTGGAGC GCTGGGAGGC GCTCGAGGCG AAACGTAAGC CTTCATGA
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Protein sequence | MRRIRSSRCA RGRRVAGRGA PARGNDEDFS RGRRPPRDAS LRIPRRRNLP CRHRTAGSAS RAECRRSGCR PRCLRPAALP LRYRSSHKSG RPSSCIRRLR SCCTLEEPLH STSPDRANAA YRATQHAMVP DLPRPPVRAR RSLIADCRLP TANRRSPSTA DATDASTAPH AASVPHVGRP PPGRALSAHR TARRLPARSA RAPNPPRAER ARCILRWPFN PKGESNALQQ VAGRRIHRGR ALRVRLGARG SEGVFRRAGR RRVRLEPRSR EIRSRRRHRA SARGRHDAPH RSPPPADRRQ AGGQRRRDSR QRSLAAFRQA SDRDGGEAVA RSAHADAAVR RWRAPLVRPG DEPDHHGQRQ VGHRAGEGRA RFPPARAAGR RARAGVARFA PGHCAVSAPC AAPGTMGASD FFSAVFPMSL YSITGAQLAF GHVALLDHAD FSLEAGERVG LIGRNGAGKS SLLKIVADLA KPDDGLVTRQ QHLVTVYVPQ EPEFAAGQTV FDAVASGLTD TRALLAEYDE IAHRLADTPE GAEHDALLAR MNALQSSLDA TDAWNWRTRV ATTLAQIGLD GDTKIDALSG GMQKRAALAR ALVVQPDVLL LDEPTNHLDF DGIRWLEELL VAQRAGLFFI THDRAFLDRV ATRIVELDRG RLLSYPGNFS AYQTRKAQQL EVERVENEKF DKLLAQEEVW IRKGVEARRT RSVGRVARLE QMRRERAERR NAQGNVRLDV AQGEKSGKIV AELTDVTKRY GERTVVERFS ATVMRGDKIG FVGPNGAGKT TLLKLILGEL KPDAGTVRTG TNLQVAYFDQ MRAQLDQEKS LADTISPGSE WVEIGGVRKH VMSYLGDFLF APERARSPVK SLSGGERNRL LLARLFARPA NVLVLDEPTN DLDIPTLELL EELLTDYDGT VLLVSHDRAF LDNVVTSVIA SEGNGLWREY VGGFTDWQIQ RERAQRIAHE EAAKRAAKEP ASAKDDAPKG AAGRNAQRTV KLSFNEQREL DALPARIAAL EAEQKAIAAQ LEDGSIFSKD PQEGTRLTER FAALDDELLA ALERWEALEA KRKPS
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