| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1244 |
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| Symbol | |
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| ID | 3689670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 1294326 |
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| End bp | 1295414 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637727700 |
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| Product | porin |
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| Protein accession | YP_332655 |
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| Protein GI | 76809200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.289233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAG TTATGCTCGC GGCGGTACTG GCGACTGCCG GAGTGGCGGC TCACGCTCAA
AGCAGCGTGA CGCTGTACGG CCGTCTGGAC GCCGGCATCG AATACATGAA CGGCCTGCCG
AGCGCGAACG GCGGCAGCAC GAGCCGCTGG CGCGCGGAAA GCGGCAACTG GGGCACGAGC
CTCTGGGGCT TGAAGGGCTC CGAGGACATC GGCGGCGGCA ACAAGATCGT GTTCCAGTTG
GAAGGCAGCT TCGACACGAT GAACGGCAAC GGCCCGGGCG CCGGCAGCAT CTGGAACCGC
TGGGCAACGA TCGGCATCTC CAACGACACG TACGGTACCC TGCTGCTCGG CCGCGAGCTC
GCGATCGCGA ACGGCGTGTG GGACTTCGAT CCGTTCGGCC AGTCGTCGTG GTCGACGGCT
TCGCTCGTGC GCGGGCGCAA CTGGAACAAG ACCAGCAACA ACATTTCGTA TCAATCGCCG
AAGTTCTACG GCTTCGACGT CTACGGCCAA TACGCGCTGT CGAACGCGAC GAACTGGAAC
GGCAACGGCT CGACGAGCCA GGGCCGCAGC GCGGGCCTGC AGCTCACCTA CACGACCTCG
CTGTTCCAGA TCCGCGGCCT CTATGACGAA GCGCGCGATC CGGCGAACGG CAAGCTCGAC
GACGTGTTCA ACTACTCGCG CGAATATTTC GCCGGCGTGA ACGTGTTCCT CGGCCAGTTC
AAGCTGCAGG CGGCATACCA GGCGTCGCAC GCGGACGGCG GCCCGGTCGT GAACAACGGC
ATCACGACGA CCCAGCAGGT CTGGGGCGGC GTGACGTGGC AGGCAACGCC CGCCGCCGCG
CTGATCGCGG CCGTCTATCA CGTGAACGCG AATCACGGCG GCGGCAACGC GAACATCTTC
ACGGTCGGCG GCTCGTACAA CCTGTCGAAG CGCACGCTGC TCGACGTGCA GGTCGCGACG
GTGCGCAACA GCAAGACCGC GAACTTCGGC CTGAACGCGA ACCCGGCCGG CACCGACATC
TCGACCGGCA ATCCGAAGTT CGGCGGCAGC CAGACGGGCG TGTACGCCGG CATCCAGCAC
TTGTTCTGA
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| Protein sequence | MKKVMLAAVL ATAGVAAHAQ SSVTLYGRLD AGIEYMNGLP SANGGSTSRW RAESGNWGTS
LWGLKGSEDI GGGNKIVFQL EGSFDTMNGN GPGAGSIWNR WATIGISNDT YGTLLLGREL
AIANGVWDFD PFGQSSWSTA SLVRGRNWNK TSNNISYQSP KFYGFDVYGQ YALSNATNWN
GNGSTSQGRS AGLQLTYTTS LFQIRGLYDE ARDPANGKLD DVFNYSREYF AGVNVFLGQF
KLQAAYQASH ADGGPVVNNG ITTTQQVWGG VTWQATPAAA LIAAVYHVNA NHGGGNANIF
TVGGSYNLSK RTLLDVQVAT VRNSKTANFG LNANPAGTDI STGNPKFGGS QTGVYAGIQH
LF
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