Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1223 |
Symbol | |
ID | 3689451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 1272384 |
End bp | 1272941 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637727679 |
Product | spore coat protein U precursor |
Protein accession | YP_332634 |
Protein GI | 76809826 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.174119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACGGA AAAACGACCA TAGCTACGGT GCGATTGCAA TGTATTTTCT TAAACACCCT CTGTTGTCGG CGCTCGCCGC CGCCGTTCTC GTCGCAACGC CGTCGTTTCG TCCCGCCACG GCCGCGACCG CCACGGCCAC CTTCACCGTC TCGCTGACGA TCCAGGCCAA CTGCACGATT TCCGCCAATG CGCTGTCGTT CGGCACGAAC GGCGTGCTCG CGACGGCCGT CAATCAGCAG ACGACGCTGT CCGTCACCTG CTCGAACACG ACCTCCTACA ACGTCGGGCT CGACGCGGGC AACGTGTCCG GCTCGACCGT CTCGAGCCGC CTGCTCGCCG GCACGACGAC GGGCAACACC AGCACGACGG TCAGCTTCCA GCTCTATCAG GATTCGGGCC ATACCACGAT CTGGGGCAAT ACAGTCGGCA CCAACACGGT GAGCGGTACC GGCAACGGCA CCGCGCAGAC GCTCAGCGTA TACGGCCAGG TGCCCGCGCA AACGACGCCG AAGCCCGATA CCTACGAGTC GACCGTCACC GCGACCATCA CCTTCTGA
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Protein sequence | MVRKNDHSYG AIAMYFLKHP LLSALAAAVL VATPSFRPAT AATATATFTV SLTIQANCTI SANALSFGTN GVLATAVNQQ TTLSVTCSNT TSYNVGLDAG NVSGSTVSSR LLAGTTTGNT STTVSFQLYQ DSGHTTIWGN TVGTNTVSGT GNGTAQTLSV YGQVPAQTTP KPDTYESTVT ATITF
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