| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1061 |
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| Symbol | pdxH |
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| ID | 3690168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 1112763 |
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| End bp | 1113407 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637727517 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_332473 |
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| Protein GI | 162210094 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.040983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC TTGCCGATCT CCGCACCAAC TACTCCCGCG CGTCGCTCGA CGCGGCGGAC
GTGAACCCGA ATCCGTTCGT CCAGTTCGAC GTCTGGTTCA AGGAAGCGCT CGACGCGCAA
CTGCCCGAGC CCAACACGAT GACGCTCGCG ACCGTCGACG AATCCGGCCG GCCGTCCGCG
CGGATCGTCC TCATCAAGGG CGCCGACGAG CGCGGCTTCG TGTTCTTCAC GAACTACGAA
AGCCGCAAGG GGCGCGAGCT CGCGCACAAC CCGAACGCGG CGCTGCTCTT CTACTGGATC
GAACTCGAGC GCCAGGTGCG CGTCGAGGGG CGCATCGAGA AGACGAGCGA AGAGGAAAGC
GACCGGTATT TCGCGTCGCG GCCGCTCGGC TCGCGGATCG GCGCATGGGC GTCCGAGCAG
AGCGCGGTGA TCGAGAGCCG CGCGCTGCTC GAGGCGCGCG AGAAGGAAAT CGGCGCGCGC
TTCGGCGAGA ACCCGCCGCG CCCGCCGCAC TGGGGCGGCT ACCGTCTCGT GCCGAGCTCG
ATCGAATTCT GGCAGGGCCG CCCGTCGCGG CTCCACGACC GCCTGCTGTA TACGCGCGAC
GCCGCGTCGG CGAGCGGCTG GAAGATCGCG CGCCTCGCGC CGTAA
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| Protein sequence | MTTLADLRTN YSRASLDAAD VNPNPFVQFD VWFKEALDAQ LPEPNTMTLA TVDESGRPSA
RIVLIKGADE RGFVFFTNYE SRKGRELAHN PNAALLFYWI ELERQVRVEG RIEKTSEEES
DRYFASRPLG SRIGAWASEQ SAVIESRALL EAREKEIGAR FGENPPRPPH WGGYRLVPSS
IEFWQGRPSR LHDRLLYTRD AASASGWKIA RLAP
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