Gene BURPS1710b_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0947 
Symbol 
ID3688514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp991787 
End bp992887 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content74% 
IMG OID637727403 
Productmandelate racemase 
Protein accessionYP_332360 
Protein GI76809895 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.215309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT TTTCCGAACC GATCATCCGC TGCGCGAAGG CGCGCGCTTA CCGCATTCCG 
ACGGACCGGC CCGAGGCGGA CGGCACGTTC GCGTGGACGG ACACGACGAT CGTCGTCGCG
ACGCTCGACG CGGGCGACGC GCACGGCATC GGCTACACGT ACACCGACGC GAGCGCTGCC
GCGCTGATCG AGCGGATGCT CGCGCCGGCG CTCGACGGGC GCAGCGCGTT CGACATCGGC
GGCGCGCTCG CCGCGCTGCG GCGCGCGGTC CGCAACGTCG GCCGCGGCGG CGTCGCGGCC
ACGGCGATAT CGGCGCTCGA CGCCGCGCTG TGGGACGCGA AGGCGAAGCT GCTCGGCCTG
CCGCTCGCGA AGCTGCTCGG CGGCGTGCGC GACGCGGTGC CCGTGTACGG CAGCGGCGGC
TTCACGAGCT ACGACGAGCA CGCGTTGCGC GCGCAGCTCG AAGGCTGGCG CGCGCAGGGG
CTGCACGCGT GCAAGATCAA GGTCGGCAGC GCGCCGCGCG ACGATCCGGC GCGCGTGCGC
ATCGCGCGCG ACGCGCTCGG CGGCGGCGTC GCGCTGTTCG TCGACGCGAA CGGCGCGTTC
GCGCCGCGCG ATGCGCTCGC GTTCGCGCAG CGCATCGCCG AGTGCGACGT GCGCTGGTTC
GAGGAGCCGG TGAGCGCCGA CGACATCGAC GGCCTGCGCT TCGTGCGCGA ACGGCTCGCC
GCGGGCGTCG ACGTCGCGGC GGGCGAGTAC GGCTATACGC TCGACGACTT TCGCGTCTTG
CTCGCGTCGG GCGCGCTCGA CGTGCTGCAG GCGGACGCCA CGCGCTGCGG CGGCGTGAGC
GGCTTTCTCG AGGCCGCGAC GCTCGCCGAC GCGTTTCATC GCGACCTGTC CGCGCATTGC
GCGCCCGCGC TGCACCGGCA CGTGTGCTGC GCGGCGCCGC GGGTGCGGCA CGTCGAGTGG
TTTCACGATC ATGCGCGAAT CGAGCGGATG CTGTTCGACG GTGCGCCGAC GCCGCGTGAC
GGCGCGATCG CGCCGGACAT GTCGCGGCCC GGGCTCGGCA TCGAGCTGAA AGCGCAGGAC
GCGGCGCGCT TTGCGGTCTG A
 
Protein sequence
MKPFSEPIIR CAKARAYRIP TDRPEADGTF AWTDTTIVVA TLDAGDAHGI GYTYTDASAA 
ALIERMLAPA LDGRSAFDIG GALAALRRAV RNVGRGGVAA TAISALDAAL WDAKAKLLGL
PLAKLLGGVR DAVPVYGSGG FTSYDEHALR AQLEGWRAQG LHACKIKVGS APRDDPARVR
IARDALGGGV ALFVDANGAF APRDALAFAQ RIAECDVRWF EEPVSADDID GLRFVRERLA
AGVDVAAGEY GYTLDDFRVL LASGALDVLQ ADATRCGGVS GFLEAATLAD AFHRDLSAHC
APALHRHVCC AAPRVRHVEW FHDHARIERM LFDGAPTPRD GAIAPDMSRP GLGIELKAQD
AARFAV