| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0889 |
|---|
| Symbol | miaB |
|---|
| ID | 3689124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 924865 |
|---|
| End bp | 926238 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637727345 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_332302 |
|---|
| Protein GI | 76809108 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.23524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA AAGTTTACGT AAAAACCTTC GGCTGCCAGA TGAACGAGTA CGACTCCGAC
AAGATGGTCG ACGTGCTCAA TGCGGCCGAG GGCCTCGAGA AAACCGACAC CCCGGAAGAC
GCGGACATCA TCCTGTTCAA CACCTGCTCG GTGCGAGAAA AGGCGCAGGA GAAGGTGTTC
TCCGATCTCG GCCGCGTGCG CGAGCTGAAG GAAGCGAAGC CGGACCTGCT GATCGGCGTC
GGCGGCTGCG TGGCGAGCCA GGAAGGCGCG TCGATCGTCG CGCGCGCGCC GTACGTCGAT
CTCGTGTTCG GCCCGCAAAC GCTGCACCGC CTGCCGCAGA TGATCGACGC GCGCCGCGAA
AGCGGCCGCG CGCAGGTCGA CATCACGTTC CCCGAAATCG AGAAGTTCGA CCATCTGCCG
CCCGCTCGCG TCGAAGGGCC GAGCGCGTTC GTGTCGATCA TGGAAGGCTG CTCGAAGTAC
TGCAGCTACT GCGTCGTGCC GTACACGCGC GGCGATGAAG TGTCGCGCCC GCTCGACGAC
GTCTTGACCG AGGTCGCGGG CCTCGCCGAC CAGGGCGTGC GCGAAGTCAC GCTGCTCGGC
CAGAACGTGA ACGCCTACCG CGGCGCGATC GCGGCCGGCT CGGCCGAGAT CGCCGATTTC
GCGACGCTGA TCGAATATGT CGCCGACATC CCCGGCATCG AGCGGATCCG CTACACGACA
TCGCATCCGA AGGAGTTCAC GCAGCGCCTG CTCGACGTCT ACGCGAAGGT GCCGAAGCTC
GTCGACCATC TGCACCTGCC CGTCCAGCAC GGCTCGGACC GCATCCTGAT GGCGATGAAG
CGCGGCTACA CCGTGCTCGA ATACAAATCG GTGATCCGCA AGCTGCGCGC GATCCGCCCG
AATCTGTCGC TGTCCACGAA CATCATCGTG GGTTTCCCCG GCGAGACCGA CGCCGACTTC
GACAAGACGA TGGCGCTCGT TCACGAGATG AGCTACGACA CGAGCTTCTC GTTCATCTAC
AGCCCGCGGC CCGGCACGCC GGCCGCGAAT CTCGCCGACG ACACGCCGCG CGAGCTCAAG
CTCAAGCGCC TGCAACATCT GCAGGCGACG ATCGAGGAGA ACGTCGCGAG GATCAGCCAG
TCGATGCTCG GCAAGGTCGA GCGAATCCTC GTCGAGGGGC CGTCGCGCAA GGATCCGAAC
GAGCTCGCGG GCCGCACCGA GAACAACCGG GTCGTGAATT TTCCCGCGCC GAGCGCCGCG
CACCCGCGCC TGATCGGCCA GATGATCGAC GTGAAGATCA ATCACGCGTA TCCCCACTCG
CTGCGCGGCG AGCTCGTGCT CGCGCACGGC GACGCGAGCG CCGCCACGCA CTGA
|
|---|
| Protein sequence | MTKKVYVKTF GCQMNEYDSD KMVDVLNAAE GLEKTDTPED ADIILFNTCS VREKAQEKVF
SDLGRVRELK EAKPDLLIGV GGCVASQEGA SIVARAPYVD LVFGPQTLHR LPQMIDARRE
SGRAQVDITF PEIEKFDHLP PARVEGPSAF VSIMEGCSKY CSYCVVPYTR GDEVSRPLDD
VLTEVAGLAD QGVREVTLLG QNVNAYRGAI AAGSAEIADF ATLIEYVADI PGIERIRYTT
SHPKEFTQRL LDVYAKVPKL VDHLHLPVQH GSDRILMAMK RGYTVLEYKS VIRKLRAIRP
NLSLSTNIIV GFPGETDADF DKTMALVHEM SYDTSFSFIY SPRPGTPAAN LADDTPRELK
LKRLQHLQAT IEENVARISQ SMLGKVERIL VEGPSRKDPN ELAGRTENNR VVNFPAPSAA
HPRLIGQMID VKINHAYPHS LRGELVLAHG DASAATH
|
|---|
| |