Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0584 |
Symbol | |
ID | 3691578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 599087 |
End bp | 600673 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637727040 |
Product | peptide ABC transporter, periplasmic peptide-binding protein |
Protein accession | YP_331998 |
Protein GI | 76811220 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.542939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTTCA CGCACATCGC CGCCGCCGCG CTCGTCGCCG CCGCTTCCGT CGCCGCCGCG AAACCGCTGA CGGTCTGCAC CGAGTCGAGC CCGGACGGCT TCGACGTCGT TCAGTACAAC TCGCTCGTCA CGACGAACGC ATCCGCCGAC GTCGTCTTCA ACACGCTCGT GTCGTACGAC GAAGCGACGA AAAAGGTGGT GCCCGCGCTC GCGGACAAAT GGGACGTGAG CGCCGACGGC CTCGCGTACA CGTTCCATCT GCGCCCGAAC GTCGCGTTCC AGACCACCGA CTCCTTCAAG CCGACGCGCG CGCTCGACGC CGACGACGTC CTCTTCACGT TCGGCCGGAT GCTCGACGAC GCGAATCCGT GGCACAAGGT CGCGGGCGCG AGCGGCTTTC CGCATGCGCA GTCGATGGGC CTCGCGAAGC TCGTGAAGGC GGTCACGAAG ATCGACGAGT CGACCGTGAA GTTCGAACTG AACGAACCGA ACGCGACGTT CGTGCCGATC CTCACGATGG GCTTCGCGTC GATCTACTCG GCCGAGTACG CGGATCAGCT GCTGAAGGCG GGCAAGCAGG CGGACTTGAA CGCGAAGCCG GTCGGCACCG GGCCGTTCGT GCTGAAGAGT TACACGAAGG ACGCGGTGAT CCGCTACGAG GCGAACCCGA CGTACTGGGG GCCGAAGCCG AAGGTCGAGC GCCTCATCTA CGCGATCACG CCCGATCCGT CGGTGCGCGC GCAGAAGGTG AAGGCGGGCG AATGCCAGAT CGCGCTGTCG CCGAAGCCGC AGGACGTCGC GGCCGCGAAG GCTGACCGCG CGCTGAGGGT CGTCGAGACG CCCGCGTTCA TGACCGCGTT CGTCGCGCTC AACACGCAGA AGAAACCGCT CGACAACGAC AAGGTTCGCG AGGCGCTCAA TCTCGCGTTC GATCGCGCGA CGTACCTGAA GGTCGTGTTC GACAACACGG CGACGCCCGC GACGAATCCG TATCCGCCGA ACACGTGGAG CTACGCGAAA TCGATCGCGC CGTATCCGCA CGATCCGGCG AAGGCGAAGC AGTTGCTCGC GCAGGCGGGC TTCCCGAACG GCTTCTCGAC GACGATCTGG GTGCGCCCGA CGGGCAGCGT GCTGAACCCG AACCCGAAGG CGGGCGCGGA GCTGCTGCAG GCCGACCTCG CGAAGATCGG CGTGAAGGCG GACGTGCGGG TGATCGAATG GGGCGAGCTG ATCAAGCAGG CGAAGCTCGG CCAGCACGAT CTGCTGTTCA TGGGCTTCGC CGGCGACAAC GGCGATCCGG ACAACATCCT CACGCCGCAA TTCAGTTGCA ACTCGGTGAA GTCGGGCCTG AACTTCGCGC GCTATTGCGA TCCGAAGCTC GACAAGCTGA TCGCCGACGC AAAGGAAACC ACCGATCAAG CCAAGCGCGC GAAGCTGTAC GAGGCCGCGC AGAAGATCAT CCACGACGAG GCGCTGTGGA TTCCCCTCGG CTATCCGACC GCCGCGGCGA TCACCCGGCC GAACGTCGCC GGCTATCGCG TGAGCCCGTT CGGGCGGCAG CACTTCGACG CGGTCTCGGT GCAGTAA
|
Protein sequence | MRFTHIAAAA LVAAASVAAA KPLTVCTESS PDGFDVVQYN SLVTTNASAD VVFNTLVSYD EATKKVVPAL ADKWDVSADG LAYTFHLRPN VAFQTTDSFK PTRALDADDV LFTFGRMLDD ANPWHKVAGA SGFPHAQSMG LAKLVKAVTK IDESTVKFEL NEPNATFVPI LTMGFASIYS AEYADQLLKA GKQADLNAKP VGTGPFVLKS YTKDAVIRYE ANPTYWGPKP KVERLIYAIT PDPSVRAQKV KAGECQIALS PKPQDVAAAK ADRALRVVET PAFMTAFVAL NTQKKPLDND KVREALNLAF DRATYLKVVF DNTATPATNP YPPNTWSYAK SIAPYPHDPA KAKQLLAQAG FPNGFSTTIW VRPTGSVLNP NPKAGAELLQ ADLAKIGVKA DVRVIEWGEL IKQAKLGQHD LLFMGFAGDN GDPDNILTPQ FSCNSVKSGL NFARYCDPKL DKLIADAKET TDQAKRAKLY EAAQKIIHDE ALWIPLGYPT AAAITRPNVA GYRVSPFGRQ HFDAVSVQ
|
| |