| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0534 |
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| Symbol | |
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| ID | 3691796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 539393 |
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| End bp | 540556 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637726990 |
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| Product | putative outer membrane porin protein precursor |
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| Protein accession | YP_331948 |
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| Protein GI | 76810813 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0511105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGC CCCCGAACGG CATCGCGTCT TCCGGACGTC GGCCGCCCGT TCGCCTCGCA
TCCGTTAGAC GACAATCTGG AGATCACATG AAGTCATCCT TCAGCCGCGC GCTGCAAACC
ACTTTCGCGT GCGCCGCCGT GGCGGCGCTG GCCGCCGGCG CTTCGGGCGC GCGCGCGCAA
TCGAGCGTTC AGCTCTACGG GCAGGTCGAC GAATGGATCG GCGCGCAGAA ATTCCCCGGC
GGGCAGCGCG CGTGGGGCGT GCAGGGCGGC GGAATGTCGA CGTCGTACTG GGGGCTGCGC
GGCACCGAGG ATCTCGGCGG CGGTTATCAG GCGATCTTCA CGCTCGAGGA TTTCTTCCGC
GCGCAGAACG GCCATTACGG CCGCTTCGAC GGCGACACGT TCTTCGGCCG CAATGCGTAT
GTCGGACTCG CGACGCCTTA CGGCACGGTG CGCGCCGGGC GCCTGACGAC GCAGCTGTTC
ATCTCGACGA TCCTCTTCAA CCCGTTCATC GATTCGTATG TGTTCTCGCC GATGGTCTAC
CACGTGTTCC TCGGCCTCGG CACGTTCCCG ACGTATACGA CCGATCAGGG CGTCGTCGGC
GATTCGGGCT GGAACAACGC GATCGACTAC ACGAGCCCGA GCTTCGGCGG CTTGAACGCG
GCCGCGATGT ACGCGCTCGG CAACACGGCG GGCGACAACC GCTCGAAGAA GTGGAGCGGC
CAGCTGAACT ATTCGAGCGG CCCGTTCGCG GCGACGGCCG TCTACCAGTA CGTGAACTTC
AACGGCGGCC CGGGCGATCT CGGCGCGCTC GTGTCCGGCA TGAAGAGCCA GGGCGTCGCG
CAGCTCGGGC TGTCGTACGA CTTCAAGCTT GCGAAGATCT ACGCGCAATA CATGTATACG
AAGAACGAAC TGAACACGGG AAGCTGGCAC GTGAACACCG CGCAAGGCGG CGTATCGGTG
CCGCTCGGGC CGGGCAGCGC GCTCGCGTCG TATGCGTATT CGCGCGATTC GGGCGGGCAC
GACCAGACGC GTCGCACGTG GGCGCTCGGC TACGATTATC CGCTGTCCAA GCGCACCGAC
GTGTATGCCG CGTACATGAA CGACCGCTAT TCGGGCATGT CGGGCGGCGA CACGTTCGGC
GCGGGAATTC GTGCGAAGTT CTAA
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| Protein sequence | MATPPNGIAS SGRRPPVRLA SVRRQSGDHM KSSFSRALQT TFACAAVAAL AAGASGARAQ
SSVQLYGQVD EWIGAQKFPG GQRAWGVQGG GMSTSYWGLR GTEDLGGGYQ AIFTLEDFFR
AQNGHYGRFD GDTFFGRNAY VGLATPYGTV RAGRLTTQLF ISTILFNPFI DSYVFSPMVY
HVFLGLGTFP TYTTDQGVVG DSGWNNAIDY TSPSFGGLNA AAMYALGNTA GDNRSKKWSG
QLNYSSGPFA ATAVYQYVNF NGGPGDLGAL VSGMKSQGVA QLGLSYDFKL AKIYAQYMYT
KNELNTGSWH VNTAQGGVSV PLGPGSALAS YAYSRDSGGH DQTRRTWALG YDYPLSKRTD
VYAAYMNDRY SGMSGGDTFG AGIRAKF
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